Fed-batch production of MCL-PHA with elevated 3-hydroxynonanoate content
© Jiang et al.; licensee Springer. 2013
Received: 26 July 2013
Accepted: 24 August 2013
Published: 29 August 2013
With no inhibition of β-oxidation, Pseudomonas putida KT2440 produces medium-chain-length poly(3-hydroxyalkanoate) (MCL-PHA) with approximately 65 mol% 3-hydroxynonanoate (HN) from nonanoic acid. Production of PHA with higher HN content and an adjustable monomeric composition was obtained using acrylic acid, a fatty acid β-oxidation inhibitor, together with nonanoic acid and glucose as co-substrates in fed-batch fermentations. Different monomeric compositions were obtained by varying the feeding conditions to impose different specific growth rates and inhibitor feed concentrations. At a nonanoic acid: glucose: acrylic acid feed mass ratio of 1.25: 1: 0.05 and a specific growth rate of 0.15 h-1, 71.4 g L-1 biomass was produced containing 75.5% PHA with 89 mol% HN at a cumulative PHA productivity of 1.8 g L-1 h-1.
Poly(3-hydroxyalkanoates) (PHAs) are a family of biodegradable, and non-cytotoxic biopolyesters produced from renewable resources. Certain types of PHAs, such as poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (P(HB-HV)) and poly(3-hydroxybutyrate-co-3-hydroxyhexanoate) (P(HB-HHx)), have been recognized as substitutes for petroleum-based thermoplastics in various applications and have been or are planned to be produced commercially (Philip et al. 2007; Poirier et al. 1995).
In contrast to short-chain-length PHAs (SCL-PHAs) such as P(HB-HV) and SCL-MCL-PHAs such as P(HB-HHx), medium-chain-length PHAs (MCL-PHAs) are thermoplastic elastomers with a much higher elongation-to-break (Van der Walle et al. 2001). They also have lower melting temperatures, are less crystalline and crystallize more slowly (Gagnon et al. 1992; Gross et al. 1989; Marchessault et al. 1990). Most bioreactor scale production of MCL-PHAs have used structurally related MCL carbon substrates, such as octane (Hazenberg and Witholt 1997), nonanoic acid (Sun et al. 2007), and oleic acid (Lee et al. 2000). Although Liu et al. (2011) and Chung et al. (2011) effectively showed MCL homopolymer production by extensive deletion of genes in the β-oxidation pathway, this approach does not allow tailored control of the monomeric composition. We have recently demonstrated that using a combination of a PHA structurally related substrate (e.g. nonanoic or octanoic acid), a structurally unrelated substrate (e.g. glucose), and a fatty acid β-oxidation inhibitor (e.g. acrylic acid), a series of poly(3-hydroxynonanoate-co-3-hydroxyheptanoate) (PHN) with adjustable 3-hydroxynonanoate (HN) content (69 to 96 mol%) or poly(3-hydroxyoctanoate-co-3-hydroxyhexanoate) (PHO) with adjustable 3-hydroxyoctanoate (HO) content (88 to 98 mol%) can be produced (Jiang et al. 2012). It was also demonstrated that the PHA thermal and mechanical properties improved as the amount of the dominant monomer increased. Substrate utilization efficiency also improved with a yield of fatty acid to PHA conversion as high as 0.91 g g-1. These results were produced in chemostat but this cultivation technique is not used commercially. In order to be of commercial interest, this novel approach to MCL-PHA production must be shown to be applicable to fed-batch culture.
The objective of this study was to develop a methodology for controlling the monomeric composition of MCL-PHA in efficient fed-batch fermentations. Specifically, the production of PHN copolymers with different HN content was investigated by controlling the specific growth rate and the β-oxidation inhibitor concentration in the feed. The study also employed glucose and nonanoic acid co-feeding to meet the requirements of both cell growth and PHA accumulation, respectively.
Materials and methods
Microorganism and growth medium
Pseudomonas putida KT2440 (ATCC 47054) was maintained on nutrient agar plates at 4°C. The inoculum medium for all fermentations contained per liter: (NH4)2SO4 4.70 g, MgSO4 · 7 H2O 0.80 g, Na2HPO4 · 7 H2O 12.00 g, KH2PO4 2.70 g, nutrient broth 1.00 g, glucose 9.00 g. The initial culture medium contained per liter: (NH4)2SO4 4.70 g, MgSO4 · 7H2O 0.80 g, Na2HPO4 · 7H2O 18.0 g, KH2PO4 4.05 g, trace element solution 10 mL. The trace element solution contained per liter: FeSO4 · 7H2O 10.0 g, CaCl2 · 2H2O 3.0 g, ZnSO4 · 7H2O 2.2 g, MnSO4 · 4H2O 0.5 g, H3BO3 0.3 g, CoCl2 · 6H2O 0.2 g, Na2MoO4 · 2H2O 0.15 g, NiCl2 · 6H2O 0.02 g and CuSO4 · 5H2O 1.00 g. Nonanoic acid (98%, Spectrum Chemicals) was fed separately in its pure form as it is immiscible in aqueous media. Acrylic acid (Sigma-Aldrich) was added to a glucose (99.5%, Sigma-Aldrich) solution of 240 g L-1. Feeding ratios of nonanoic acid (NA), glucose (G) and acrylic acid (AA) at 1.25: 1: 0.01 and 1.25: 1: 0.05 (w/w) were tested. Nitrogen was provided as 14% (w/v) ammonia solution and also served as the base for pH control. In case of nutrient depletion, supplemental solutions of trace elements with the above composition and a phosphate solution containing 36 g L-1 Na2HPO4 · 7H2O and 8.1 g L-1 KH2PO4 were prepared. Antifoam 204 (Sigma-Aldrich) was added to nonanoic acid (1% v/v) and manually injected through a sterile septum when required.
The inoculum was grown in three 500 mL shake flasks (100 mL medium in each flask) at 28.0 ± 1°C and 200 rpm overnight. The first two fermentations were conducted in a 7 L MBR stirred tank bioreactor (Bioreactor-AG, Switzerland) with a 5 L working volume. The third fermentation was done in a 5 L Minifors bioreactor (Infors-HT, Bottmingen, Switzerland) with a 3 L working volume. The cultivation temperature was 28.5 ± 1°C and the pH was controlled at 6.85 ± 0.05 using 14% (w/v) ammonia solution. Dissolved oxygen was measured with an Ingold polarographic probe and maintained above 30% air saturation by adjusting the agitation speed and the mixture of air and oxygen flow via mass flow controllers to a total gas flow at 1 vvm. The dissolved oxygen data were acquired by a LabVIEW 6.1 (National Instrument) program. Nonanoic acid and glucose feeding was controlled via separate peristaltic pumps by the LabVIEW program based on the mass of each reservoir.
Substrate feeding and control methods
where X0 (g) is the estimated biomass at the beginning of the feeding; μ (h-1) is the desired specific growth rate; and Y X/C is the yield (g g-1) of biomass from the mixture of carbon substrates which was 0.66 g g-1, experimentally determined from continuous fermentation by feeding nonanoic acid, glucose and acrylic acid at a mass ratio of 1.25: 1: 0.05 at a specific growth rate of 0.25 h-1 (Jiang et al. 2012).
The feeding ratio of nonanoic acid to glucose in this study was 1.25: 1 (w/w). Therefore, the mass fraction of nonanoic acid (f NA) and that of glucose (f G) in the total carbon source were 0.56 and 0.44, respectively.
Exponential substrate feeding began after a lag phase of approximately 5 h. Fermentations with a specific growth rate of 0.25 h-1 were conducted only under exponential feeding. However, in an effort to avoid nonanoic acid and acrylic acid overfeeding, exponential feeding at 0.15 h-1 was conducted for 23.3 h before changing to a constant feed rate of 8 g L-1 h-1.
Biomass concentration was determined gravimetrically from duplicate samples of 10 mL culture broth which were centrifuged at 6,000 × g for 15 min, washed and lyophilized. Sample supernatants were analyzed for the concentrations of residual nutrients and acrylic acid. Glucose was measured colorimetrically after reacting with 4-hydroxybenzoic hydrazide under alkaline condition (Lever 1972). Nonanoic acid was methylated in acidified methanol (Ramsay et al. 1991) and analyzed by a CP3900 Varian GC equipped with a flame ionization detector. Phosphate was measured based on the reduction of phosphomolybdate to molybdene blue (Clesceri et al. 1999). Ammonium was determined by the phenol-hypochlorite method (Weatherburn 1967). Acrylic acid was assayed by Hewlett-Packard GC equipped with a Cabowax®-PEG column after acidification with one tenth volume of 2 N hydrochloric acid (Qi et al. 1998).
PHA content and composition in the dry biomass samples were determined by methanolysis in 2 mL chloroform and 1 mL methanol which contained sulfuric acid (15% v/v) as acidifying agent and benzoic acid (0.2% w/v) as internal standard at 100°C for 4 h. After which, 1 mL distilled water was vigorously mixed on a Fisher Vortex and left overnight for phase separation. One μ L of the chloroform phase was injected into CP3900 Varian GC at a split ratio of 20. The injector and detector were maintained at 250 and 275°C, respectively. The oven heating profile was: initial 90°C for 0.5 min, 5°C min-1 to 95°C and hold for 0.5 min, 30°C min-1 to 170°C and hold for 2.5 min. The PHA standard was prepared by acetone extraction and methanol precipitation followed by three cycles of extraction and precipitation, as described by Jiang et al. (2006) and the monomeric composition characterized by GC and proton nuclear magnetic resonance at room temperature in a Bruker Avance 200 spectrometer using deuterated-chloroform containing 20 mg mL-1 PHA.
Co-feeding nonanoic acid, glucose, and acrylic acid at a mass ratio of 1.25: 1: 0.01 and a μ of 0.25 h-1
Co-feeding nonanoic acid, glucose, and acrylic acid at a mass ratio of 1.25: 1: 0.05 and a μ of 0.25 h-1
Co-feeding nonanoic acid, glucose, and acrylic acid at a mass ratio of 1.25: 1: 0.05 and a μ of 0.15 h-1
There was constant foaming from the beginning of the fermentation. This became more severe at 12 h. At this time, the phosphate (20 mL) and trace element solutions (30 mL) were added. Antifoam was added dropwise and the foam disappeared after about 30 min. Phosphate was maintained at non-limiting levels while ammonium was automatically controlled to be in the range of 1 ~ 1.5 g L-1 (Figure 3b) as in the previous two fermentations. The glucose concentration was always slightly above zero. There was a slight increase in the nonanoic acid concentration between 12 h and 16 h, but its concentration dropped after 16 h and remained below 0.5 g L-1 until near the end of the fermentation. Despite a supply of 1 vvm pure oxygen, the dissolved oxygen dropped to zero at 29.6 h and remained there for the duration of the fermentation. PHN containing about 88 mol% HN was obtained.
Comparison of the three fed-batch fermentations
Control of the monomeric composition of MCL-PHA in a fed-batch fermentation using a β-oxidation inhibitor is novel and challenging. Bacterial cultivation using fatty acid substrates in the presence of acrylic acid has been shown to produce poor growth and MCL-PHA accumulation both in our chemostat studies (Jiang et al. 2012) and in the literature (Huijberts et al. 1994; Qi et al. 1998; Ward and O’Connor 2005). This is because β-oxidation is the only mechanism of energy production from aliphatic fatty acids. Thus, the strategy of co-feeding a carbon and energy source (glucose in this study) and a PHA precursor (nonanoic acid in this study) is essential to obtain a high cell density with high PHA content.
Comparison of fermentations producing PHN using P. putida KT2440 4
Specific growth rate (h -1)
NA:G:AA 1feeding ratio (w/w/w)
Yx/c2(g g -1)
Y PHA/NA 2(g g -1)
Cumulative PHA productivity 3
(g L -1 h -1)
Sun et al. 2009
Jiang et al. 2012
Whether it is metabolized or not, acrylic acid consumption was linearly related to cell growth, in a manner similar to nonanoic acid consumption (Figures 1, 2 and 3). Since it is continuously taken up by the cells, the feeding of acrylic acid should be proportional to cell growth in order to impose a constant level of inhibition and thus a constant PHA monomeric composition. The combination of an appropriate concentration of the β-oxidation inhibitor and a growth rate which avoids toxic accumulation of both nonanoic and acrylic acid enhanced growth and PHA accumulation as well as controlled the monomeric composition. This is the first report of the use of a β-oxidation inhibitor in high-cell-density fed batch production of MCL-PHA.
This research was supported by the Natural Science and Engineering Research Council of Canada, Xerox Research Center of Canada, and a McLaughlin Scholarship and Queen’s Graduate Award to XJ Jiang.
- Chung AL, Jin HL, Huang LJ, Ye HM, Chen JC, Wu Q, Chen GQ: Biosynthesis and characterization of poly(3-hydroxydodecanoate) by ß-oxidation inhibited mutant of Pseudomonas entomophila L48. Biomacromolecules 2011, 12: 3559–3566. 10.1021/bm200770mPubMedView ArticleGoogle Scholar
- Clesceri LS, Greenberg AE, Eaton AD: Standard methods for the examination of water and wastewater. 20th edition. Washington, DC: American Public Health Association; 1999.Google Scholar
- Gagnon KD, Lenz RW, Farris RJ, Fuller RC: Crystallization behavior and its influence on the mechanical properties of a thermoplastic elastomer produced by Pseudomonas oleovorans . Macromolecules 1992, 25: 3723–3728. 10.1021/ma00040a018View ArticleGoogle Scholar
- Gross RA, Demello C, Lenz RW, Brandl H, Fuller RC: Biosynthesis and characterization of poly(beta-hydroxyalkanoates) produced by Pseudomonas oleovorans . Macromolecules 1989, 22: 1106–1115. 10.1021/ma00193a018View ArticleGoogle Scholar
- Hazenberg W, Witholt B: Efficient production of medium-chain-length poly(3-hydroxyalkanoates) from octane by Pseudomonas oleovorans : economic considerations. Appl Microbiol Biotechnol 1997, 48: 588–596. 10.1007/s002530051100View ArticleGoogle Scholar
- Huijberts GNM, Derijk TC, Dewaard P, Eggink G: C-13 nuclear-magnetic-resonance studies of Pseudomonas putida fatty-acid metabolic routes involved in poly(3-hydroxyalkanoate) synthesis. J Bacteriol 1994, 176: 1661–1666.PubMed CentralPubMedGoogle Scholar
- Jiang X, Ramsay JA, Ramsay BA: Acetone extraction of mcl-PHA from Pseudomonas putida KT2440. J Microbiol Methods 2006, 67: 212–219. 10.1016/j.mimet.2006.03.015PubMedView ArticleGoogle Scholar
- Jiang X, Sun Z, Marchessault RH, Ramsay J, Ramsay B: Biosynthesis and properties of medium-chain-length polyhydroxyalkanoates with enriched content of the dominant monomer. Biogeosciences 2012, 13: 2926–2932.Google Scholar
- Lee SY, Wong HH, Choi JI, Lee SH, Lee SC, Han CS: Production of medium-chain-length polyhydroxyalkanoates by high-cell-density cultivation of Pseudomonas putida under phosphorus limitation. Biotechnol Bioeng 2000, 68: 466–470. 10.1002/(SICI)1097-0290(20000520)68:4<466::AID-BIT12>3.0.CO;2-TPubMedView ArticleGoogle Scholar
- Lever M: New reaction for colorimetric determination of carbohydrates. Anal Biochem 1972, 47: 273–279. 10.1016/0003-2697(72)90301-6PubMedView ArticleGoogle Scholar
- Liu Q, Luo G, Zhou XR, Chen GQ: Biosynthesis of poly(3-hydroxydecanoate) and 3-hydroxydodecanoate dominating polyhydroxyalkanoates by β-oxidation pathway inhibited Pseudomonas putida . Metabolic Eng 2011, 13: 11–17. 10.1016/j.ymben.2010.10.004View ArticleGoogle Scholar
- Maclean H, Sun Z, Ramsay J, Ramsay B: Decaying exponential feeding of nonanoic acid for the production of medium-chain-length poly(3-hydroxyalkanoates) by Pseudomonas putida KT2440. Can J Chem 2008, 86: 564–569. 10.1139/v08-062View ArticleGoogle Scholar
- Marchessault RH, Monasterios CJ, Morin FG, Sundararajan PR: Chiral poly(beta-hydroxyalkanoates) - an adaptable helix influenced by the alkane side-chain. Int J Biol Macromol 1990, 12: 158–165. 10.1016/0141-8130(90)90068-LPubMedView ArticleGoogle Scholar
- Philip S, Keshavarz T, Roy I: Polyhydroxyalkanoates: biodegradable polymers with a range of applications. J Chem Technol Biotechnol 2007, 82: 233–247. 10.1002/jctb.1667View ArticleGoogle Scholar
- Poirier Y, Nawrath C, Somerville C: Production of polyhydroxyalkanoates, a family of biodegradable plastics and elastomers in bacteria and plants. Biogeosciences 1995, 13: 142–150.Google Scholar
- Qi Q, Steinbuchel A, Rehm BH: Metabolic routing towards polyhydroxyalkanoic acid synthesis in recombinant Escherichia coli (fadR): inhibition of fatty acid beta-oxidation by acrylic acid. FEMS Microbiol Lett 1998, 167: 89–94.PubMedGoogle Scholar
- Ramsay BA, Saracovan I, Ramsay JA, Marchessault RH: Continuous production of long-side-chain poly-beta-hydroxyalkanoates by Pseudomonas oleovorans . Appl Environ Microbiol 1991, 57: 625–629.PubMed CentralPubMedGoogle Scholar
- Sun Z, Ramsay JA, Guay M, Ramsay BA: Automated feeding strategies for high-cell-density fed-batch cultivation of Pseudomonas putida KT2440. Appl Microbiol Biotechnol 2006, 71: 423–431. 10.1007/s00253-005-0191-7PubMedView ArticleGoogle Scholar
- Sun Z, Ramsay JA, Guay M, Ramsay BA: Carbon-limited fed-batch production of medium-chain-length polyhydroxyalkanoates from nonanoic acid by Pseudomonas putida KT2440. Appl Microbiol Biotechnol 2007, 74: 69–77. 10.1007/s00253-006-0655-4PubMedView ArticleGoogle Scholar
- Sun Z, Ramsay JA, Guay M, Ramsay BA: Enhanced yield of medium-chain-length polyhydroxyalkanoates from nonanoic acid by co-feeding glucose in carbon-limited, fed-batch culture. J Biotechnol 2009, 143: 262–267. 10.1016/j.jbiotec.2009.07.014PubMedView ArticleGoogle Scholar
- Van der Walle GAM, De Koning GJM, Weusthuis RA, Eggink G: Properties, modifications and applications of biopolyesters. Adv Biochemical Eng Biotechnol 2001, 71: 263–291.Google Scholar
- Ward PG, O’Connor KE: Bacterial synthesis of polyhydroxyalkanoates containing aromatic and aliphatic monomers by Pseudomonas putida CA-3. Inter J Biol Macromol 2005, 35: 127–131. 10.1016/j.ijbiomac.2005.01.001View ArticleGoogle Scholar
- Weatherburn MW: Phenol-hypochlorite reaction for determination of ammonia. Anal Chem 1967, 39: 971–974. 10.1021/ac60252a045View ArticleGoogle Scholar
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