Adak S, Bandyopadhyay U, Bandyopadhyay D, Banerjee RK (1998) Mechanism of horseradish peroxidase catalyzed epinephrine oxidation: obligatory role of endogenous O2
− and H2O2. Biochemistry 37:16922–16933
Article
CAS
PubMed
Google Scholar
Ahmad M, Roberts JN, Hardiman EM, Singh R, Eltis LD, Bugg TDH (2011) Identification of DypB from Rhodococcus jostii RHA1 as a lignin peroxidase. Biochemistry 50:5096–5107
Article
CAS
PubMed
Google Scholar
Arnao MB, Acosta M, del Ría-Cánovas F (1990) A kinetic study on the suicide inactivation of peroxidase by hydrogen peroxide. Biochim Biophys Acta 1041:43–47
Article
CAS
PubMed
Google Scholar
Ben Aziz A, Grossman S, Ascarelli I, Budowski P (1971) Carotene-bleaching activities of lip-oxygenase and heme proteins as studied by a direct spectrophotometric method. Phytochemistry 10:1445–1452
Article
CAS
Google Scholar
Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72(1–2):248–254
Article
CAS
PubMed
Google Scholar
Camarero S, Sarkar S, Ruiz-Dueñas FJ, Martínez ÁT (1999) Description of a versatile peroxidase involved in the natural degradation of lignin that has both manganese peroxidase and lignin peroxidase substrate interaction sites. J Biol Chem 274:10324–10330
Article
CAS
PubMed
Google Scholar
Dequaire M, Limoges B, Moiroux J, Savéant J (2002) Mediated electrochemistry of horseradish peroxidase. Catalysis and inhibition. J Am Chem Soc 124:240–253
Article
CAS
PubMed
Google Scholar
Eggert C, Temp U, Eriksson KE (1996) The ligninolytic system of the white rot fungus Pycnoporus cinnabarinus: purification and characterization of the laccase. Appl Environ Microbiol 62:1151–1158
CAS
PubMed
PubMed Central
Google Scholar
Faraco V, Piscitelli A, Sannia G, Giardina P (2007) Identification of a new member of the dye-decolorizing peroxidase family from Pleurotus ostreatus. World J Microbiol Biotechnol 23:889–893
Article
CAS
Google Scholar
Fernández-Fueyo E, Linde D, Almendral D, López-Lucendo MFJ, Martíınez ÁT (2015) Description of the first fungal dye-decolorizing peroxidase oxidizing manganese(II). Appl Microbiol Biotechnol 99:8927–8942
Article
PubMed
PubMed Central
Google Scholar
Gazarian IG, Lagrimini LM, George SJ, Thorneley RN (1996) Anionic tobacco peroxidase is active at extremely low pH: veratryl alcohol oxidation with a pH optimum of 1.8. Biochem J 320:369–372
Article
CAS
PubMed
PubMed Central
Google Scholar
Gazarian IG, Lagrimini LM, Mellon FA, Naldrett MJ, Ashby GA, Thorneley RN (1998) Identification of skatolyl hydroperoxide and its role in the peroxidase-catalysed oxidation of indol-3-yl acetic acid. Biochem J 333(Pt 1):223–232
Article
CAS
PubMed
PubMed Central
Google Scholar
Glenn JK, Gold MH (1985) Purification and characterization of an extracellular Mn(II)-dependent peroxidase from the lignin-degrading basidiomycete Phanerochaete chrysosporium. Arch Biochem Biophys 242:329–341
Article
CAS
PubMed
Google Scholar
Heinfling A, Martíınez ÁT, Bergbauer M, Szewzyk U (1998) Transformation of industrial dyes by manganese peroxidases from Bjerkandera adusta and Pleurotus eryngii in a manganese-independent reaction. Appl Environ Microbiol 64:2788–2793
CAS
PubMed
PubMed Central
Google Scholar
Henne KR, Kunze KL, Zheng YM, Christmas P, Soberman RJ, Rettie AE (2001) Covalent linkage of prosthetic heme to CYP4 family P450 enzymes. Biochemistry 40:12925–12931
Article
CAS
PubMed
Google Scholar
Hofrichter M, Ullrich R, Pecyna MJ, Liers C, Lundell T (2010) New and classic families of secreted fungal heme peroxidases. Appl Microbiol Biotechnol 87:871–897
Article
CAS
PubMed
Google Scholar
Hülsdau B (2007) Oxidativer Abbau von Carotinoiden durch Pilzenzyme. Gottfried Wilhelm Leibniz Universität, Hannover
Google Scholar
Husain Q (2006) Potential applications of the oxidoreductive enzymes in the decolorization and detoxification of textile and other synthetic dyes from polluted water: a review. Crit Rev Biotechnol 26:201–221
Article
CAS
PubMed
Google Scholar
Johjima T, Ohkuma M, Kudo T (2003) Isolation and cDNA cloning of novel hydrogen peroxide-dependent phenol oxidase from the basidiomycete Termitomyces albuminosus. Appl Microbiol Biotechnol 61:220–225
Article
CAS
PubMed
Google Scholar
Kang D, Gho YS, Suh M, Kang C (2002) Highly sensitive and fast protein detection with Coomassie brilliant blue in sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Bull Korean Chem Soc 23:1511–1512
Article
CAS
Google Scholar
Kim SJ, Shoda M (1999a) Decolorization of molasses and a dye by a newly isolated strain of the fungus Geotrichum candidum Dec 1. Biotechnol Bioeng 62:114–119
Article
CAS
PubMed
Google Scholar
Kim SJ, Shoda M (1999b) Purification and characterization of a novel peroxidase from Geotrichum candidum Dec 1 involved in decolorization of dyes. Appl Environ Microbiol 65:1029–1035
CAS
PubMed
PubMed Central
Google Scholar
Kim SJ, Ishikawa K, Hirai M, Shoda M (1995) Characteristics of a newly isolated fungus, Geotrichum candidum Dec 1, which decolorizes various dyes. J Ferment Bioeng 79:601–607
Article
CAS
Google Scholar
Koduri RS, Tien M (1995) Oxidation of guaiacol by lignin peroxidase. Role of veratryl alcohol. J Biol Chem 270:22254–22258
Article
CAS
PubMed
Google Scholar
Liers C, Bobeth C, Pecyna M, Ullrich R, Hofrichter M (2010) DyP-like peroxidases of the jelly fungus Auricularia auricula-judae oxidize nonphenolic lignin model compounds and high-redox potential dyes. Appl Microbiol Biotechnol 85:1869–1879
Article
CAS
PubMed
Google Scholar
Liers C, Aranda E, Strittmatter E, Piontek K, Plattner DA, Zorn H, Ullrich R, Hofrichter M (2013a) Phenol oxidation by DyP-type peroxidases in comparison to fungal and plant peroxidases. Enzym, J Mol Catal B
Google Scholar
Liers C, Pecyna MJ, Kellner H, Worrich A, Zorn H, Steffen KT, Hofrichter M, Ullrich R (2013b) Substrate oxidation by dye-decolorizing peroxidases (DyPs) from wood-and litter-degrading agaricomycetes compared to other fungal and plant heme-peroxidases. Appl Microbiol Biotechnol 97:5839–5849
Article
CAS
PubMed
Google Scholar
Linde D, Coscolñas FJ (2014) Heterologous expression and physicochemical characterization of a fungal dye-decolorizing peroxidase from Auricularia auricula-judae. Protein Expr Purif 103:28–37
Article
CAS
PubMed
Google Scholar
Linde D, Pogni R, Cañellas M, Lucas F, Guallar V, Baratto MC, Sinicropi A, Sáez-Jiménez V, Coscolñas FJ, MartÁngel T (2015a) Catalytic surface radical in dye-decolorizing peroxidase: a computational, spectroscopic and site-directed mutagenesis study. Biochem J 466:253–262
Article
CAS
PubMed
PubMed Central
Google Scholar
Linde D, Ruiz-Dueñas FJ, Fernández-Fueyo E, Guallar V, Hammel KE, Pogni R, Martínez ÁT (2015b) Basidiomycete DyPs: Genomic diversity, structural-functional aspects, reaction mechanism and environmental significance. Arch Biochem Biophys 574:66–74
Article
CAS
PubMed
Google Scholar
Lundell TK, Mäkelä MR, Hildeén K (2010) Lignin-modifying enzymes in filamentous basidiomycetes—ecological, functional and phylogenetic review. J Basic Microbiol 50:5–20
Article
CAS
PubMed
Google Scholar
Martíınez ÁT (2002) Molecular biology and structure-function of lignin-degrading heme peroxidases. Enzyme Microb Technol 30:425–444
Article
Google Scholar
McEldoon JP, Pokora AR, Dordick JS (1995) Lignin peroxidase-type activity of soybean peroxidase. Enzyme Microb Technol 17:359–365
Article
CAS
Google Scholar
Mester T, Field JA (1998) Characterization of a novel manganese peroxidase-lignin peroxidase hybrid isozyme produced by Bjerkandera species strain BOS55 in the absence of manganese. J Biol Chem 273:15412–15417
Article
CAS
PubMed
Google Scholar
Morgenstern I, Klopman S, Hibbett DS (2008) Molecular evolution and diversity of lignin degrading heme peroxidases in the Agaricomycetes. J Mol Evol 66:243–257
Article
CAS
PubMed
Google Scholar
Peterson R, Nevalainen H (2012) Trichoderma reesei RUT-C30—thirty years of strain improvement. Microbiology 158:58–68
Article
CAS
PubMed
Google Scholar
Poulos TL (2010) Thirty years of heme peroxidase structural biology. Arch Biochem Biophys 500:3–12
Article
CAS
PubMed
PubMed Central
Google Scholar
Pühse M, Szweda RT, Ma Y, Jeworrek C, Winter R, Zorn H (2009) Marasmius scorodonius extracellular dimeric peroxidase—exploring its temperature and pressure stability. Biochim Biophys Acta 1794:1091–1098
Article
PubMed
Google Scholar
Rajarathnam S, Shashirekha MN, Bano Z (1998) Biodegradative and biosynthetic capacities of mushrooms: present and future strategies. Crit Rev Biotechnol 18:91–236
Article
CAS
PubMed
Google Scholar
Renganathan V, Gold MH (1986) Spectral characterization of the oxidized states of lignin peroxidase, an extracellular heme enzyme from the white rot basidiomycete Phanerochaete chrysosporium. Biochemistry 25:1626–1631
Article
CAS
Google Scholar
Salvachúa D, Prieto A, Martíınez ÁT, Martíınez MJ (2013) Characterization of a novel dye–decolorizing peroxidase DyP–type enzyme from Irpex lacteus and its application in enzymatic hydrolysis of wheat straw. Appl Environ Microbiol 79:4316–4324
Article
PubMed
PubMed Central
Google Scholar
Saparrat MCN, Guillén F, Arambarri AM, Martíınez ÁT (2002) Induction, isolation, and characterization of two laccases from the white rot basidiomycete Coriolopsis rigida. Appl Environ Microbiol 68:1534–1540
Article
CAS
PubMed
PubMed Central
Google Scholar
Scheibner M (2006) Identifizierung und Charakterisierung carotinoidabbauender Enzyme aus Basidiomyceten. Gottfried Wilhelm Leibniz Universität, Hannover
Google Scholar
Scheibner M, Hülsdau B, Zelena K, Nimtz M, Boer L, Berger RG, Zorn H (2008) Novel peroxidases of Marasmius scorodonius degrade β-carotene. Appl Microbiol Biotechnol 77:1241–1250
Article
CAS
PubMed
Google Scholar
Schüttmann I, Bouws H, Szweda RT, Suckow M, Czermak P, Zorn H (2014) Induction, characterization, and heterologous expression of a carotenoid degrading versatile peroxidase from Pleurotus sapidus. J Mol Catal B Enzym 103:79–84
Article
Google Scholar
Scotter MJ, Wilson LA, Appleton GP, Castle L (1998) Analysis of annatto (Bixa orellana) food coloring formulations. 1. Determination of coloring components and colored thermal degradation products by high–performance liquid chromatography with photodiode array detection. J Agric Food Chem 46:1031–1038
Article
CAS
Google Scholar
Strittmatter E, Liers C, Ullrich R, Wachter S, Hofrichter M, Plattner DA, Piontek K (2013) First crystal structure of a fungal high-redox potential dye-decolorizing peroxidase: substrate interaction sites and long-range electron transfer. J Biol Chem 288:4095–4102
Article
CAS
PubMed
Google Scholar
Sugano Y (2009) DyP–type peroxidases comprise a novel heme peroxidase family. Cell Mol Life Sci 66:1387–1403
Article
CAS
PubMed
Google Scholar
Sugano Y, Sasaki K, Shoda M (1999) cDNA cloning and genetic analysis of a novel decolorizing enzyme, peroxidase gene dyp from Geotrichum candidum Dec 1. J Biosci Bioeng 87:411–417
Article
CAS
PubMed
Google Scholar
Sugano Y, Nakano R, Sasaki K, Shoda M (2000) Efficient heterologous expression in Aspergillus oryzae of a unique dye–decolorizing peroxidase, DyP, of Geotrichum candidum Dec 1. Appl Environ Microbiol 66:1754–1758
Article
CAS
PubMed
PubMed Central
Google Scholar
Sugano Y, Ishii Y, Shoda M (2004) Role of H164 in a unique dye decolorizing heme peroxidase DyP. Biochem Biophys Res Commun 322:126–132
Article
CAS
PubMed
Google Scholar
Sugano Y, Matsushima Y, Shoda M (2006) Complete decolorization of the anthraquinone dye Reactive blue 5 by the concerted action of two peroxidases from Thanatephorus cucumeris Dec 1. Appl Microbiol Biotechnol 73:862–871
Article
CAS
PubMed
Google Scholar
Sugano Y, Muramatsu R, Ichiyanagi A, Sato T, Shoda M (2007) DyP, a unique dye-decolorizing peroxidase, represents a novel heme peroxidase family. Asp171 replaces the distal histidine of classical peroxidases. J Biol Chem 282:36652–36658
Article
CAS
PubMed
Google Scholar
Szweda RT, Schmidt K, Zorn H (2013) Bleaching of colored whey and milk by a multiple-enzyme system. Eur Food Res Technol 237:377–384
Article
CAS
Google Scholar
Thomas PE, Ryan D, Levin W (1976) An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels. Anal Biochem 75:168–176
Article
CAS
PubMed
Google Scholar
Wang Y, Vazquez-Duhalt R, Pickard MA (2002) Purification, characterization, and chemical modification of manganese peroxidase from Bjerkandera adusta UAMH 8258. Curr Microbiol 45:77–87
Article
CAS
PubMed
Google Scholar
Ward G, Hadar Y, Bilkis I, Dosoretz CG (2003) Mechanistic features of lignin peroxidase-catalyzed oxidation of substituted phenols and 1,2–dimethoxyarenes. J Biol Chem 278:39726–39734
Article
CAS
PubMed
Google Scholar
Welinder KG (1992) Superfamily of plant, fungal and bacterial peroxidases. Curr Opin Struct Biol 2:388–393
Article
CAS
Google Scholar
Yoshida T, Sugano Y (2015) A structural and functional perspective of DyP-type peroxidase family. Arch Biochem Biophys 574:49–55
Article
CAS
PubMed
Google Scholar
Yoshida T, Tsuge H, Konno H, Hisabori T, Sugano Y (2011) The catalytic mechanism of dye-decolorizing peroxidase DyP may require the swinging movement of an aspartic acid residue. FEBS J 278:2387–2394
Article
CAS
PubMed
Google Scholar
Yoshida T, Tsuge H, Hisabori T, Sugano Y (2012) Crystal structures of dye–decolorizing peroxidase with ascorbic acid and 2,6–dimethoxyphenol. FEBS Lett 586:4351–4356
Article
CAS
PubMed
Google Scholar
Zámocký M, Furtmüller PG, Bellei M, Battistuzzi G, Stadlmann J, Vlasits J, Obinger C (2009) Intracellular catalase/peroxidase from the phytopathogenic rice blast fungus Magnaporthe grisea: expression analysis and biochemical characterization of the recombinant protein. Biochem J 418:443–451
Article
PubMed
Google Scholar
Zámocký M, Hofbauer S, Schaffner I, Gasselhuber B, Nicolussi A, Soudi M, Pirker KF, Furtmüller PG, Obinger C (2015) Independent evolution of four heme peroxidase superfamilies. Arch Biochem Biophys 574:108–119
Article
PubMed
PubMed Central
Google Scholar
Zorn H, Langhoff S, Scheibner M, Berger RG (2003a) Cleavage of β, β–carotene to flavor compounds by fungi. Appl Microbiol Biotechnol 62:331–336
Article
CAS
PubMed
Google Scholar
Zorn H, Langhoff S, Scheibner M, Nimtz M, Berger RG (2003b) A peroxidase from Lepista irina cleaves β, β-carotene to flavor compounds. Biol Chem 384:1049–1056
Article
CAS
PubMed
Google Scholar
Zorn H, Bouws H, Takenberg M, Nimtz M, Getzlaff R, Breithaupt DE, Berger RG (2005) An extracellular carboxylesterase from the basidiomycete Pleurotus sapidus hydrolyses xanthophyll esters. Biol Chem 386:435–440
Article
CAS
PubMed
Google Scholar