Arnaldos M, Pagilla KR (2014) Implementation of a demand-side approach to reduce aeration requirements of activated sludge systems: directed acclimation of biomass and its effect at the process level. Water Res 62:147–155
Article
CAS
PubMed
Google Scholar
Arnaldos M, Kunkel SA, Stark BC, Pagilla KR (2013) Enhanced heme protein expression by ammonia-oxidizing communities acclimated to low dissolved oxygen conditions. Appl Microbiol Biotechnol 97:10211–10221
Article
CAS
PubMed
Google Scholar
Arnaldos M, Kunkel SA, Stark BC, Pagilla KR (2014) Characterization of heme protein expressed by ammonia-oxidizing bacteria under low dissolved oxygen conditions. Appl Microbiol Biotechnol 98:3231–3239
Article
CAS
PubMed
Google Scholar
Berube PM, Samudrala R, Stahl DA (2007) Transcription of all amoC copies is associated with recovery of Nitrosomonas
europaea from ammonia starvation. J Bact 189:3935–3944
Article
CAS
PubMed Central
PubMed
Google Scholar
Chain P, Lamerdin J, Larimer F, Regala W, Lao V, Land M et al (2003) Complete genome sequence of the ammonia-oxidizing bacterium and obligate chemolithoautotroph Nitrosomonas europaea. J Bact 185:2759–2773
Article
CAS
PubMed Central
PubMed
Google Scholar
Dasgupta S, Masukata H, Tomizawa J (1987) Multiple mechanisms for initiation of ColE1 replication: DNA synthesis in the presence and absence of Ribonuclease H. Cell 51:1113–1122
Article
CAS
PubMed
Google Scholar
Dikshit KL, Webster DA (1988) Cloning, characterization and expression of the bacterial globin gene from Vitreoscilla in Escherichia coli. Gene 70:377–386
Article
CAS
PubMed
Google Scholar
Dogan I, Pagilla KR, Webster DA, Stark BC (2006) Expression of Vitreoscilla hemoglobin in Gordonia amarae enhances biosurfactant production. J Indust Microbiol Biotechnol 33:693–700
Article
CAS
Google Scholar
Fish PA, Webster DA, Stark BC (2000) Vitreoscilla hemoglobin enhances the first step in 2,4-dinitrotoluene degradation in vitro and at low aeration in vivo. J Molec Catalysis B Enzymatic 9:75–82
Article
CAS
Google Scholar
Frey AD, Kallio PT (2003) Bacterial hemoglobins and flavohemoglobins: versatile proteins and their impact on microbiology and biotechnology. FEMS Microbiol Rev 27:525–545
Article
CAS
PubMed
Google Scholar
Hageman RH, Hucklesby DP (1971) Nitrate reductase in higher plants. Methods Enzymol 23:491–503
Article
Google Scholar
Hill DR, Belbin TJ, Thorsteinsson MV, Bassam D, Brass S, Ernst A et al (1996) GlbN (cyanoglobin) is a peripheral membrane protein that is restricted to certain Nostoc spp. J Bact 178:6587–6598
CAS
PubMed Central
PubMed
Google Scholar
Hommes NG, Sayavedra-Soto LA, Arp DJ (2001) Transcript analysis of multiple Copies of amo (encoding ammonia monooxygenase) and hao (encoding hydroxylamine oxidoreductase) in Nitrosomonas europaea. J Bact 183:1096–1100
Article
CAS
PubMed Central
PubMed
Google Scholar
Hyman MR, Arp DJ (1992) 14C2H2- and 14CO2-labeling studies of the de novo synthesis of polypeptides by Nitrosomonas
europaea during recovery from acetylene and light inactivation of ammonia monooxygenase. J Biol Chem 267:1534–1545
CAS
PubMed
Google Scholar
Lin JM, Stark BC, Webster DA (2003) Effects of Vitreoscilla hemoglobin on the 2,4-dinitrotoluene (DNT) dioxygenase activity of Burkholderia and on DNT degradation in two-phase bioreactors. J Indust Microbiol Biotechnol 30:362–368
Article
CAS
Google Scholar
Liu SC, Liu YX, Webster DA, Stark BC (1994) Sequence of the region downstream of the Vitreoscilla hemoglobin gene: vgb is not part of a multigene operon. Appl Microbiol Biotechnol 42:304–308
CAS
PubMed
Google Scholar
Liu SC, Webster DA, Stark BC (1995) Cloning and expression of the Vitreoscilla hemoglobin gene in Pseudomonads: effects on cell growth. Appl Microbiol Biotechnol 44:419–424
Article
CAS
Google Scholar
Park KW, Kim KJ, Howard AJ, Stark BC, Webster DA (2002) Vitreoscilla hemoglobin binds to subunit I of cytochrome bo ubiquinol oxidases. J Biol Chem 277:33334–33337
Article
CAS
PubMed
Google Scholar
Patel SM, Stark BC, Hwang KW, Dikshit KL, Webster DA (2000) Cloning and expression of Vitreoscilla hemoglobin gene in Burkholderia sp. strain DNT for enhancement of 2,4-dinitrotoluene degradation. Biotechnol Prog 16:26–30
Article
CAS
PubMed
Google Scholar
Pathania R, Navani NK, Rajamohan G, Dikshit KL (2002) Mycobacterium tuberculosis hemoglobin HbO associates with membranes and stimulates cellular respiration of recombinant Escherichia coli. J Biol Chem 277:15293–15302
Article
CAS
PubMed
Google Scholar
Ramandeep, Hwang KW, Raje M, Kim KJ, Stark BC, Dikshit KL, Webster DA (2001) Vitreoscilla hemoglobin: intracellular localization and binding to membranes. J Biol Chem 276:24781–24789
Article
CAS
PubMed
Google Scholar
Rittmann BE, McCarty PL (2001) Environmental biotechnology: principles and applications. McGraw-Hill, New York
Google Scholar
Rosso D, Stenstrom MK, Larson LE (2008) Aeration of large-scale municipal wastewater treatment plants: state of the art. Water Sci Technol 57:973–978
Article
PubMed
Google Scholar
Sayavedra-Soto LA, Stein LY (2011) Genetic transformation of ammonia oxidizing bacteria. Meth Enzymol 486:389–402
Article
CAS
PubMed
Google Scholar
Stark BC, Dikshit KL, Pagilla KR (2011) Recent advances in understanding the structure, function, and biotechnological usefulness of the hemoglobin from the bacterium Vitreoscilla. Biotechnol Lett 33:1705–1714
Article
CAS
PubMed
Google Scholar
Stark BC, Dikshit KL, Pagilla KR (2012) The Biochemistry of Vitreoscilla hemoglobin. Computat Struct Biotechnol J 3:e201210002
Google Scholar
Stark BC, Dikshit KL, Pagilla KR (2015) Recent applications of Vitreoscilla hemoglobin technology in bioproduct synthesis and bioremediation. Appl Microbiol Biotechnol 99:1627–1636
Article
CAS
PubMed
Google Scholar
Thorsteinsson MV, Bevan DR, Potts M, Dou Y, Eich RF, Hargrove MS et al (1999) A cyanobacterial hemoglobin with unusual ligand binding kinetics and stability properties. Biochemistry 38:2117–2126
Article
CAS
PubMed
Google Scholar
Van der Gieze R, Hessels GI, Nienhuis-Kuiper M, Dijkhuizen L (2008) Characterization of a second Rhodococcus erythropolis SQ1 3-ketosteroid 9-alpha-hydroxylase activity comprising a terminal oxygenase homologue, KshA2, active with oxygenase-reductase component KshB. Appl Environ Microbiol 74:7197–7203
Article
Google Scholar
Vieira J, Messing J (1982) The pUC plasmids, an M13mp7-derived system for insertion mutagenesis and sequencing with synthetic universal primers. Gene 19:259–268
Article
CAS
PubMed
Google Scholar
Vinogradov SN, Moens L (2008) Diversity of globin function: enzymatic, transport, storage, and sensing. J Biol Chem 283:8773–8777
Article
CAS
PubMed
Google Scholar
Vinogradov SN, Hoogewijs D, Bailey X, Arredondo-Peter R, Gough J, Dewilde S et al (2006) A phylogenomic profile of globins. BMC Evol Biol 6:31
Article
PubMed Central
PubMed
Google Scholar
Wainwright LM, Elvers KT, Park SF, Poole RK (2005) A truncated haemoglobin implicated in oxygen metabolism by the microaerophilic food-borne pathogen Campylobacter jejuni. Microbiology 151:4079–4091
Article
CAS
PubMed
Google Scholar
Webster DA (1987) Structure and function of bacterial hemoglobin and related proteins. In: Eichorn GC, Marzilli LG (eds) Advances in inorganic biochemistry, vol 7. Elsevier, New York, pp 245–265
Google Scholar
Zhang L, Li Y, Wang Z, Xia Y, Chen W, Tang K (2007) Recent developments and future prospects of Vitreoscilla hemoglobin applications in metabolic engineering. Biotechnol Adv 25:123–136
Article
CAS
PubMed
Google Scholar