Table 3 RT-qPCR validation of selected differentially expressed genes in B. velezensis CL-41
From: Comparative genomic and transcriptome analysis of Bacillus velezensis CL-4 fermented corn germ meal
NCBI gene code | Enzyme description | FCGM0h 2 2−ΔΔCT | FCGM48h3 2−ΔΔCT |
|---|---|---|---|
gene-K4L72_RS06255 | 6-phospho-β-galactosidase | 4.97 ± 3.51 | 15.37 ± 3.78 |
gene-K4L72_RS04325 | 6-phospho-α-glucosidase | 2.22 ± 1.06 | 881.76 ± 139.04 |
gene-K4L72_RS15355 | α-glucosidase | 1.10 ± 0.18 | 290.28 ± 37.98 |
gene-K4L72_RS01625 | α-amylase | 1.45 ± 0.41 | 4.66 ± 1.12 |
gene-K4L72_RS14170 | Arabinan endo-1,5-alpha-L-arabinosidase | 1.69 ± 0.60 | 3.01 ± 0.93 |
gene-K4L72_RS08970 | xylan 1,4-beta-xylosidase | 1.13 ± 0.12 | 21.12 ± 6.64 |
gene-K4L72_RS19300 | Arabinan endo-1,5-alpha-L-arabinosidase | 0.81 ± 0.19 | 354.71 ± 50.62 |
gene-K4L72_RS14125 | α-N-arabinofuranosidase | 2.89 ± 1.70 | 8.34 ± 1.63 |
gene-K4L72_RS14020 | α-N-arabinofuranosidase | 1.26 ± 0.23 | 13.56 ± 3.83 |
gene-K4L72_RS19275 | pectin lyase | 1.92 ± 1.09 | 94.96 ± 27.75 |
gene-K4L72_RS13250 | acetyl xylan esterase | 1.61 ± 0.54 | 7.29 ± 0.99 |
gene-K4L72_RS04250 | acetyl xylan esterase | 1.14 ± 0.13 | 40.43 ± 6.14 |
gene-K4L72_RS08580 | acetyl xylan esterase | 0.82 ± 0.19 | 66.54 ± 7.68 |
gene-K4L72_RS09050 | copper-dependent lytic polysaccharide monooxygenases (LPMOs) | 0.99 ± 0.15 | 3.63 ± 0.83 |