Ahmad M, Roberts JN, Hardiman EM, Singh R, Eltis LD, Bugg TDH (2011) Identification of DypB from Rhodococcus jostii RHA1 as a lignin peroxidase. Biochemistry 50:5096–5107
Article
CAS
Google Scholar
Amaral LF, Moriel P, Foglio MA, Mazzola PG (2013) Caryocar brasiliense supercritical CO2 extract possesses antimicrobial and antioxidant properties useful for personal care products. BMC Complement Altern Med 14:73. https://doi.org/10.1186/1472-6882-14-73
Article
Google Scholar
Berry FH and Lombard FF (1978) Basidiomycetes associated with decay of living oak trees. Forest Service Research Paper NE-413
Brown ME, Barros T, Chang MCY (2012) Identification and characterization of a multifunctional dye peroxidase from a lignin-reactive bacterium. ACS Chem Biol 7:2074–2081
Article
CAS
Google Scholar
Camarero S, Sarkar S, Ruiz-Dueñas FJ, Martínez MJ, Martínez AT (1999) Description of a versatile peroxidase involved in the natural degradation of lignin that has both manganese peroxidase and lignin peroxidase substrate interaction sites. J Biol Chem 274:10324–10330
Article
CAS
Google Scholar
DiCarlo JE, Norville JE, Mali P, Rios X, Aach J, Church GM (2013) Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems. Nucleic Acids Res 41:4336–4343
Article
CAS
Google Scholar
Gomi N, Yoshida S, Matsumoto K, Okudomi M, Konno H, Hisabori T, Sugano Y (2011) Degradation of the synthetic dye amaranth by the fungus Bjerkandera adusta Dec 1: inference of the degradation pathway from an analysis of decolorized products. Biodegradation 22:1239–1245
Article
CAS
Google Scholar
Jara C, Leyton M, Osorio M, Silva V, Fleming F, Paz M, Madrid A, Mellao M (2017) Antioxidant, phenolic and antifungal profiles of Acanthus mollis. Nat Prod Res 31:2325–2328. https://doi.org/10.1080/14786419.2017.1299726
Article
CAS
PubMed
Google Scholar
Johjima T, Itoh N, Kabuto M, Tokimura F, Nakagawa T, Wariishi H, Tanaka H (1999) Direct interaction of lignin and lignin peroxidase from Phanerochaete chrysosporium. Proc Natl Acad Sci USA 96:1989–1994
Article
CAS
Google Scholar
Johjima T, Ohkuma M, Kudo T (2003) Isolation and cDNA cloning of novel hydrogen peroxide-dependent phenol oxidase from the basidiomycete Termitomyces albuminosus. Appl Microbiol Biotechnol 61:220–225
Article
CAS
Google Scholar
Kellner H, Luis P, Pecyna MJ, Barbi F, Kapturska D, Kruger D, Zak DR, Marmeisse R, Vandenbol M, Hofrichter M (2014) Widespread occurrence of expressed fungal secretory peroxidases in forest soils. PLoS ONE 9:e95557
Article
Google Scholar
Kim SJ, Ishikawa K, Hirai M, Shoda M (1995) Characteristics of a newly isolated fungus, Geotrichum candidum Dec 1, which decolorizes various dyes. J Ferment Bioeng 79:601–607
Article
CAS
Google Scholar
Korripally P, Hunt CG, Houtman CJ, Jones DC, Kitin PJ, Cullen D, Hammel KE (2015) Regulation of gene expression during the onset of ligninolytic oxidation by Phanerochaete chrysosporium on spruce wood. Appl Environ Microbiol 81:7802–7812
Article
CAS
Google Scholar
Liers C, Bobeth C, Pecyna M, Ullrich R, Hofrichter M (2010) DyP-like peroxidases of the jelly fungus Auricularia auricula-judae oxidize nonphenolic lignin model compounds and high-redox potential dyes. Appl Microbiol Biotechnol 85:1869–1879
Article
CAS
Google Scholar
Liers C, Pecyna MJ, Kellner H, Worrich A, Zorn H, Steffen KT, Hofrichter M, Ullrich R (2013) Substrate oxidation by dye-decolorizing peroxidases (DyPs) from wood- and litter-degrading agaricomycetes compared to other fungal and plant heme-peroxidases. Appl Microbiol Biotechnol 97:5839–5849
Article
CAS
Google Scholar
Linde D, Ruiz-Dueñas FJ, Fernández-Fueyo E, Guallar V, Hammel KE, Pogni R, Martínez AT (2015) Basidiomycete DyPs: genomic diversity, structural–functional aspects, reaction mechanism and environmental significance. Arch Biochem Biophys 574:66–74
Article
CAS
Google Scholar
Manojlovic NT, Solujic S, Sukdolak S, Milosev M (2005) Antifungal activity of Rubia tinctorum, Rhamnus frangula and Caloplaca cerina. Fitoterapia 76:244–246
Article
CAS
Google Scholar
Matsu-ura T, Baek M, Kwon J, Hong C (2015) Efficient gene editing in Neurospora crassa with CRISPR technology. Fungal Biol Biotechnol 2:4
Article
Google Scholar
Ogola HJO, Kamiike T, Hashimoto N, Ashida H, Ishikawa T, Shibata H, Sawa Y (2009) Molecular characterization of a novel peroxidase from the cyanobacterium Anabaena sp. strain PCC 7120. Appl Environ Microbiol 75:7059–7518
Article
Google Scholar
Pollegioni L, Tonin F, Rosini E (2015) Lignin-degrading enzymes. FEBS J 282:1190–1213
Article
CAS
Google Scholar
Rahmanpour R, Bugg TDH (2013) Assembly in vitro of Rhodococcus jostii RHA1 encapsulin and peroxidase DypB to form a nanocompartment. FEBS J 280:2097–2104
Article
CAS
Google Scholar
Roberts JN, Singh R, Grigg JC, Murphy MEP, Bugg TDH, Eltis LD (2011) Characterization of dye-decolorizing peroxidases from Rhodococcus jostii RHA1. Biochemistry 50:5108–5119
Article
CAS
Google Scholar
Salvachúa D, Prieto A, Martínez AT, Martínez MJ (2013) Characterization of a novel dye-decolorizimg peroxidase (DyP)-type enzyme from Irpex lacteus and its application in enzymatic hydrolysis of wheat straw. Appl Environ Microbiol 79:4316–4324
Article
Google Scholar
Santos A, Mendes S, Brissos V, Martins LO (2014) New dye-decolorizing peroxidases from Bacillus subtilis and Pseudomonas putida MET94: towards biotechnological applications. Appl Microbiol Biotechnol 98:2053–2065
Article
CAS
Google Scholar
Scheibner M, Hulsdau B, Zelena K, Nimtz M, de Boer L, Berger RG, Zorn H (2008) Novel peroxidases of Marasmius scorodonius degrade beta-carotene. Appl Microbiol Biotechnol 77:1241–1250
Article
CAS
Google Scholar
Schuster M, Schweizer G, Reissmann S, Kahmann R (2016) Genome editing in Ustilago maydis using the CRISPR-Cas system. Fungal Genet Biol 89:3–9
Article
CAS
Google Scholar
Shintani N, Sugano Y, Shoda M (2002) Decolorization of kraft pulp lignin bleaching effluent by a newly isolated fungus, Geotrichum candidum Dec 1. J Wood Sci 48:402–408
Article
CAS
Google Scholar
Singh R, Grigg JC, Armstrong Z, Murphy MEP, Eltis LD (2012) Distal heme pocket residues of B-type dye-decolorizing peroxidase: arginine but not aspartate is essential for peroxidase activity. J Biol Chem 287:10623–10630
Article
CAS
Google Scholar
Sugano Y (2009) DyP-type peroxidases comprise a novel heme peroxidase family. Cell Mol Life Sci 66:1387–1403
Article
CAS
Google Scholar
Sugano Y, Nakano R, Sasaki K, Shoda M (2000) Efficient heterologous expression in Aspergillus oryzae of a unique dye-decolorizing peroxidase, DyP, of Geotrichum candidum Dec 1. Appl Environ Microbiol 66:1754–1758
Article
CAS
Google Scholar
Sugano Y, Matsushima Y, Shoda M (2006) Complete decolorization of the anthraquinone dye Reactive blue 5 by the concerted action of two peroxidases from Thanatephorus cucumeris Dec 1. Appl Microbiol Biotechnol 73:862–871
Article
CAS
Google Scholar
Sugano Y, Muramatsu R, Ichiyanagi A, Sato T, Shoda M (2007) DyP, a unique dye-decolorizing peroxidase, represents a novel heme peroxidase family: ASP171 replaces the distal histidine of classical peroxidases. J Biol Chem 282:36652–36658
Article
CAS
Google Scholar
Sugano Y, Matsushima Y, Tsuchiya K, Aoki H, Hirai M, Shoda M (2009) Degradation pathway of an anthraquinone dye catalyzed by a unique peroxidase DyP from Thanatephorus cucumeris Dec 1. Biodegradation 20:433–440
Article
CAS
Google Scholar
Sugawara K, Nishihashi Y, Narioka T, Yoshida T, Morita M, Sugano Y (2017) Characterization of a novel DyP-type peroxidase from Streptomyces avermitilis. J Biosci Bioeng 123:425–430
Article
CAS
Google Scholar
Wariishi H, Dunford HB, MacDonald ID, Gold MH (1989) Manganese peroxidase from the lignin-degrading basidiomycete Phanerochaete chrysosporium. Transient state kinetics and reaction mechanism. J Biol Chem 264:3335–3340
CAS
PubMed
Google Scholar
Wijnsma R, Go JT, van Weerden IN, Harkes PA, Verpoorte R, Baerheim SA (1985) Anthraquinones as phytoalexins in cell and tissue cultures of Cinchona spec. Plant Cell Rep 4:241–244
Article
CAS
Google Scholar
Yoshida T, Sugano Y (2015) A structural and functional perspective of DyP-type peroxidase family. Arch Bioch Biophys 574:49–55
Article
CAS
Google Scholar