Skip to main content

Table 2 Amino acids in the mutated positions showing the percentage along with position and region name of WSSV VP28

From: Circulatory white spot syndrome virus in South-West region of Bangladesh from 2014 to 2017: molecular characterization and genetic variation

Position Amino acids (%) Region in VP28 Isolate of mutated sequence
38 E (98.4), V (1.6) α1 Thailand 2006
40 H (95.4), R (3.1), P (1.5) α1 China 2002, China-95/Dalian China 2003 (R), Isolate-03/South Korea/2009 (P)
42 D (63.1), G (36.9) α1 Bangladesh (201417), India (200607, 09, 12), Vietnam (201112)
76 T (98.5), A (1.5) β2–β3 05VN.VP28.HCM2.12_Vietnam_2012
114 Q (97), R (3) β4–β5 Kadalur-NM1_India_2009
Chidambaram-M3_India_2009
124 V (98.5), M (1.5) β5 India 2007
135 T (98.5), A (1.5) β6 07VN.VP28.BD2.12_Vietnam_2012
145 P (98.5), L (1.5) β6–β7 Thailand 2006
162 S (98.5), F (1.5) β7 India 2003
167 E (83.3), G (16.7) β7β8 Bangladesh 2014 (All Isolates), BAN/SH/SU-3/2015
173 C (98.5), R (1.5) β8 05VN.VP28.HCM2.12_Vietnam_2012
179 A (98.5), V (1.5) β8 China 2006
182 A (98.5), E (1.5) β9 Chabahar_Iran_2011
  1. The country name and year of isolation of the isolates that showed the mutation from the Reference Sequence CN01/China/2000 (Accession No.—NC_003225)
  2. Italicized data indicate the specific amino acid variations (frequency) with respective positions and regions in VP28 of WSSV isolates collected from Bangladesh and related countries