Table 1 BLAST analysis of nucleotide sequence of the PCR products obtained in amplification with ITS 1 primer
From: Fungal coexistence in the skin mycobiome: a study involving Malassezia, Candida, and Rhodotorula
Identified Species | NCBI Genome ID. | Sequence length(bp) | Query Cover% | Identity % | GenBank accession number | |
|---|---|---|---|---|---|---|
Rhodotorula mucilaginosa | 36242 | 589 | 98 | 99 | OR214976 | |
Candida parapsilosis (CC) | 930 | 483 | 85 | 99 | OR243746 | |
Malassezia furfur (MC) | 39877 | 681 | 97 | 97 | OR243747 | |
Primers used in this study | ||||||
ITS 1 | 5’-TCCGTAGGTGAACCTGCGG-3’ | |||||
ITS 3 | 5‘-GCATCGATGAAGAACGCAGC-3’ | |||||
ITS 4 | 5‘-TCCTCCGCTTATTGATATGC-3’ | |||||