Target bacteria | Target region | Primer/Probe | Sequence (5’- 3’) |
---|---|---|---|
S. aureus | Nuc | LFD-Sau-F3 | AATTACATAAAGAACCTGCGACTTTAATTA |
LFD-Sau-R2 | [biotin] ATGCACTTGCTTCAGGACCATATTTCTCTA | ||
NFO-Sau | [FAM]GCGATTGATGGTGATACGGTTAAATTAATG[THF]ACAAAGGTCAACCA[C3spacer] | ||
K.peneumoniae | CelB | LFD-Kpn-F2 | TTACCGCCATTCTGGTGGCGATAATTTCAAC |
LFD-Kpn-R3 | [biotin] CAAGTGATGTTAGCGGAACCTGGATTAAT | ||
NFO-Kpn | [FAM]AATGTCCCTGAATTTATCTCTAAATCGTTC [THF]CTTCATTGATTCCAG[C3spacer] | ||
P. aeruginosa | Eta | LFD-Pae-F2 | CTGAACGCCGGTAACCAGCTCAGCCACATG |
LFD-Pae-R3 | [biotin]GGCACAACACCTTGCCGCTGGCCCATTCGC | ||
NFO-Pae | [FAM]CGAAGCTGGCGCGCGATGCCACCTTCTTCG [THF]CAGGGCGCACGAGAG[C3spacer] | ||
H.influenzae | Fuck | LFD-Hin-F1 | CGTCAATGCTCACTCAACGCTTAACTGGTC |
LFD-Hin-R1 | [biotin]GAGTATCATGTCCACAAGAAATGACAGGTAC | ||
NFO-Hin | [5’FAM]AGCATCGCTGGGTTTAAGTAATAACCATTTCCCT[THF]CTATGCGTTATGCAGGT[C3spacer] |