Mining and application of constitutive promoters from Rhodosporidium toruloides

Guo, Xiao; Bai, Zhenzhen; Zhang, Yang; Zhao, Huimin; Shi, Shuobo

doi:10.1186/s13568-023-01522-1

AMB Express

Table 1 Description of identified 31 promoters from R. toruloides.

From: Mining and application of constitutive promoters from Rhodosporidium toruloides

Promoter name	ID of the corresponding gene	Length of the corresponding gene (bp)	Gene function
P_RT2	27368376	1029	L-malate dehydrogenase
P_RT7	27371855	1932	Heat shock 70 kDa protein 1/8
P_RT5	27365962	339	Hypothetical protein
P_RT32	27367759	1038	Glyceraldehyde-3-phosphate dehydrogenase
P_RT14	27369110	1386	Elongation factor EF-1 alpha subunit
P_RT50	27366188	333	60S acidic ribosomal protein p2
P_RT12	27369809	1983	Molecular chaperones mortalin/PBP74/GRP75, HSP70 superfamily
P_RT33	27364336	1341	Enolase
P_RT20	27371047	1587	Aromatic amino acid aminotransferase I
P_RT11	27364645	444	Large subunit ribosomal protein L27Ae
P_RT26	27369450	5295	ABC bile acid transporter
P_RT3	27369119	927	Mitochondrial ADP/ATP carrier
P_RT8	27371881	1122	60S ribosomal protein l2
P_RT37	27368163	2457	Hypothetical protein
P_RT35	27365895	1752	Amino acid transporter
P_RT42	27370537	642	Hypothetical protein
P_RT48	27366763	327	NP11 60S acidic ribosomal protein p1
P_RT17	27371704	2304	5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase
P_RT36	27369851	1512	Aldehyde dehydrogenase (NAD)
P_RT29	27364309	2817	Aminopeptidase 2
P_RT13	27370419	1374	Citrate synthase
P_RT15	27364137	1068	Hypothetical protein
P_RT38	27370093	1647	MFS monosaccharide transporter
P_RT22	27371731	3132	Glutamate dehydrogenase (NAD⁺)
P_RT4	27367219	1620	F0F1-type ATP synthase, beta subunit
P_RT40	27367075	1080	Alcohol dehydrogenase
P_RT45	27365879	3003	Plasma membrane H⁺- transporting ATPase
P_RT46	27366699	1662	Hypothetical protein
P_RT47	27371760	1191	Alternative oxidase
P_RT49	27368829	567	60S ribosomal protein l19
P_RT51	27366128	465	Small subunit ribosomal protein S27Ae

Corresponding gene ID was obtained according to our transcriptome sequencing data, and it can be accessed via the NCBI database (https://www.ncbi.nlm.nih.gov/gene/)

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