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Table 2 The average distance (Å) of salt bridges in 1URX and 3WZ1

From: Thermostability mechanisms of β-agarase by analyzing its structure through molecular dynamics simulation

 

Salt bridge

300 K

400 K

500 K

1URX

Asp26-Lys44

3.3

3.4

3.5

Asp200-Arg184

6.2

3.9

5.2

Asp250-Lys253

5.2

4.1

4.4

Asp122-Lys95

3.0

2.9

3.0

Glu34-Arg37

3.5

7.0

4.3

3WZ1

Asp168-Arg208

3.4

3.8

8.4

Glu60-Lys80

3.2

3.5

6.7

Glu127-Lys229

4.1

3.0

2.9

Asp252-Arg79

3.5

3.6

4.8

Asp257-Arg260

4.0

4.4

7.7

Glu128-Arg158

9.8

4.5

3.9