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Table 4 Taxonomic affiliation of the bacteria isolated of soils contaminated PCBs

From: Structure and diversity of native bacterial communities in soils contaminated with polychlorinated biphenyls

Sample site

ARDRA profilesa

Phylogenetic relationship

Phylum

Representative isolate

Closest NCBI match/similarity (%)b

Accession number

Control soil

A-A

DCB13

Bacillus thuringiensis L2.TYA/95.6

MH921878

Firmicutes

A-B

DCB14

Bacillus cereus H3/96.4

MH921879

Firmicutes

A-C

DCB18

Bacillus paramycoides SBMS4/95.7

MH921881

Firmicutes

A-D

DCB20

Achromobacter denitrificans DBT224/98.9

MH921883

Proteobacteria

A-E

DCB21

Bacillus paranthracis J-131/98.8

MH921884

Firmicutes

A-F

DCB26

Cupriavidus malaysiensis USMAA1020/99.2

MH921887

Proteobacteria

A-G

DCB27

Bacillus cereus XS 2-8/97.7

MH921888

Proteobacteria

Hs

B-A

DCB01

Burkholderia cenocepacia Z6/96.0

MH209072

Proteobacteria

B-B

DCB02

Burkholderia ambifaria ChDC B361/95.2

MH209073

Proteobacteria

B-C

DCB03

Burkholderia cepacia BC16/95.3

MH209074

Proteobacteria

B-D

DCB04

Myroides odoratus (LT899994.1)/96.6

MH209075

Flavobacteriia

B-E

DCB05

Bacillus cereus PR12/97.0

MH209076

Firmicutes

Hp

C-A

DCB07

Burkholderia anthina MYSP113/97.0

MH921875

Proteobacteria

C-B

DCB08

Burkholderia vietnamiensis BU97/95.0

MH921876

Proteobacteria

C-C

DCB12

Bacillus anthracis A4/98.3

MH921877

Firmicutes

F

D-A

DCB101

Acinetobacter pittii AB17H194/99.0

MN685207

Proteobacteria

D-B

DCB102

Kosakonia arachidis LGR-9 /99.5

MN685208

Proteobacteria

D-C

DCB103

Comamonas testosteroni OTU-c14/98.1

MN685209

Proteobacteria

D-D

DCB120

Enterobacter ludwigii 7D2C3/99.7

MN818571

Proteobacteria

D-E

DCB124

Staphylococcus saprophyticus SPB40-5/99.4

MN818574

Firmicutes

A

E-A

DCB104

Acinetobacter baumannii B8342/99.0

MN685210

Proteobacteria

E-B

DCB105

Burkholderia cenocepacia Z6/97.6

MN685211

Proteobacteria

E-C

DCB106

Comamonas testosteroni F4/98.6

MN685212

Proteobacteria

E-D

DCB122

Enterobacter oryzae Ola 01/98.1

MN818572

Proteobacteria

E-E

DCB123

Comamonas testosteroni 22/99.9

MN818573

Proteobacteria

  1. a Representative isolate selected by ARDRA profile
  2. b Similarity percentage was estimated by considering the number of nucleotide-substitutions between a pair of sequences divided by the total number of compared bases × 100%