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Table 1 The ten most up-regulated genes of Pseudomonas citronellolis LA18T with levulinic acid

From: Identification and characterization of levulinyl-CoA synthetase from Pseudomonas citronellolis, which differs phylogenetically from LvaE of Pseudomonas putida

Scaffold ORF Product Fold changea
scf_PCLA_07 PCLA_07r0385 Cation/acetate symporter 48.4
scf_PCLA_07 PCLA_07f0384 5-Aminolevulinic acid dehydratase 44.0
scf_PCLA_16 PCLA_16f0148 Putative metalloprotease 41.1
scf_PCLA_05 PCLA_05r0437 Putative structural toxin protein RtxA 30.8
scf_PCLA_05 PCLA_05f0439 TolC family type I secretion outer membrane protein 27.0
scf_PCLA_12 PCLA_12f0276 RNA polymerase sigma factor 21.6
scf_PCLA_15 PCLA_15f0186 Acetyl-CoA carboxylase 21.3
scf_PCLA_02 PCLA_02f0403 Adenylate kinase 18.5
scf_PCLA_01 PCLA_01f0750 NADH dehydrogenase 18.5
scf_PCLA_02 PCLA_02f0217 Putative membrane or periplasmic protein 15.0
  1. aExpression of genes after 3-day cultivation with LA were compared to that after 2-day cultivation with pyruvic acid (L3/P2)