Table 2 Raw read summary of sa-um using Illumina sequencing
Total reads (paired-end) | 263,741 |
Sequence length (bp) | 250 |
Total data (Mb) | 131.87 |
%GC | 52.74 |
Average base quality (phred score) | 35.11 |
Passed conserved region filter | 172,188 |
Passed spacer | 171,871 |
Passed read quality filter | 170,843 |
Passed mismatch filter | 60,117 |
Consensus reads | 60,117 |
Chimeric sequences | 0 |
Pre-processed reads | 60,117 |
Total OTUs picked | 1348 |
Total singleton OTUs | 627 |
Total OTUs after singleton removal | 722 |