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Table 1 Primers used for the PCR amplification of the hsp70 gene of Streptomyces strains

From: The heat shock protein 70 gene as a new alternative molecular marker for the taxonomic identification of Streptomyces strains

Primer

Oligonucleotide sequencea

Length (bases)

Positionsb

Orientation

hsp70-U7F

CGTGCAGTCGGTATCGACCTCGGBACVACBAACTC

35

7–41

Sense

hsp70-1326R

CGATGCCGTTGGCGTCGATGTCGAASGHSACCTCGA

36

1326–1363

Antisense

U1Fc

CGTGCAGTCGGTATCGACCTCGG

23

7–29

Sense

2Rc

CGATGCCGTTGGCGTCGATGTC

22

1326–1347

Antisense

  1. aIUB code for degenerated base positions: B = G/C/T; V = A/G/C; S = C/G; H = A/C/T
  2. bPositions correspond to the hsp70(DnaK) nucleotide sequence of S. coelicolor (GeneBank NO. L46700)
  3. cDirect sequencing primers for hsp70-U7F/hsp70-1326R