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AMB Express

Table 1 Statistics of each genome bin reconstructed from coculture

From: Metagenomic analysis reveals potential interactions in an artificial coculture

Group

Total size (bp)

No. scaffold

Longestcontig (bp)

N50 (bp)

GC content (%)

Completeness (%)a

Contamination (%)a

Relative abundance (%)b

Species name

Group1

4,830,778

38

781,449

506,457

63.63

99.8/98.28

1.5/0

6.68

Pseudomonas stutzeri TAIHU

Group2

4,926,263

18

1,392,957

1,200,254

63.43

99.51/100

1.48/0

9.19

Mesorhizobium sp. TAIHU

Group3

3,401,077

39

976,673

479,380

49.2

100/100

0/0

84.14

Synechococcus sp. PCC7002

  1. aThe completeness and contaimnation were determined by the CheckM software, the first value before the slash was the result of lineage-specific workfow and the latter one was the result of taxonomy-specific workflow in the program
  2. bThe relative abundance was the proportion of reads on each genome bin in the total merged read, excluding paired read and the alignment was performed by the BWA software
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