Table 4 Over view of the strains, enrichment culture and environmental samples tested in this study to detect pmoCA gene sequences
Name/sample | Description | Origin/location reference |
|---|---|---|
Methylocystis rosea | Pure culture Alphaproteobacteria | DSMZ 17621 |
Methylosinus sporium | Pure culture Alphaproteobacteria | DSMZ 17706 |
Methylomonas lenta | Pure culture Gammaproteobacteria | Hoefman et al. 2014 |
Methyloacidimicrobium fagopyrum 3C | Pure culture Verrucomicrobia | van Teeseling et al. 2014 |
Methyloacidiphilum fumariolicum SolV | Pure culture Verrucomicrobia | Pol et al. 2007 |
Methylomirabilis oxyfera (DAMO) | Enrichment culture NC10 phylum | Ooijpolder, NL Ettwig et al. 2008 |
Sludge from waste water treatment plant (WW) | Environmental sample | Lieshout, NL |
Bulk soil form paddy field (BS) | Environmental sample | Vercelli, Italy Vaksmaa et al. (2016) |
Rhizosphere of rice plants (ROOT) | Environmental sample | Vercelli, Italy Vaksmaa et al. (2016) |
Enrichment culture with paddy field soil (RV) | Enrichment culture | Vaksmaa et al. (2016) |
Volcanic mud (VM) | Environmental sample | Campi Flegrei caldera, Italy Pol et al. (2014) |