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Table 1 The specific primers for PCR and qPCR

From: Nitrate decreases methane production also by increasing methane oxidation through stimulating NC10 population in ruminal culture

Target organisms

Primer

Primer sequence (5′–3′)

References

Total bacteria

Forwardb

ACTCCTACGGGAGGCAGCAGT

Schwiertz et al. (2010)

Reverseb

ATTACCGCGGCTGCTGGC

Methanogens (mcrA)

Forwardb

AACGCTAGCTACAGGCTT

Denman et al. (2007)

Reverseb

CCAATGTGGGGGACCTTC

NC10

qP1mFb

GGGCTTGACATCCCACGAACCTR

He et al. (2016)

qP1Rb

GCGTCAAGCTGGAGGAAGGCG

Anammox

Pla46Fa

GGATTAGGCATGCAAGTC

Amano et al. (2007)

AMX1480Ra

TACGACTTAGTCCTCCTCAC

amoA-1Fb

GGGGTTTCTACTGGTGGT

Li et al. (2009)

amoA-2Rb

CCCCTCKGSAAAGCCTTCTTC

ANME-2d

DP142Fa

TAATACYGGATAGATCAAAG

Ding et al. (2015)

DP779Ra

GCACCGCACCTGACACCT

DP397Fb

TGGCTGTCCAGCTRTYC

DP569Rc

GRACGCCTGACGATTRAG

  1. aPrimers used for general PCR
  2. bPrimers used for qPCR
  3. cPrimers used for general PCR and qPCR