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Table 3 Homology of proteins associated with polyhydroxyalkanoate production

From: Genome features of Pseudomonas putida LS46, a novel polyhydroxyalkanoate producer and its comparison with other P. putida strains

Name Locus tag Enzyme Product size (aa) P.putidastrains
BIRD1 DOT F1 GB1 KT2440 ND6 S16 W619
FadD 07414 Acyl-CoA synthetase 565 99 100 99 94 99 99 94 87
FadA 04404 3-ketoacyl-CoA thiolase 392 99 100 100 99 99 100 99 100
FadAx 07424 Acetyl-CoA acetyltransferases 380 99 99 99 98 99 99 98 96
FadB 00695 3-hydroxyacyl-CoA dehydrogenase/epimerase 715 98 93 99 94 94 99 93 95
FadB2 07419 3-hydroxyacyl-CoA dehydrogenase 255 99 100 100 97 100 99 94 96
FadD2 21046 Acyl-CoA synthetase 562 99 99 99 98 99 99 96 93
FadE 00145 Acyl CoA dehydrogenase 601 98 93 99 94 94 99 93 95
FadE2 05901 Acyl CoA dehydrogenase 592 95 99 99 95 98 99 95 94
PhaC1 05621 Poly(R)-hydroxyalkanoic acid synthase 560 99 99 98 99 99 99 98 94
PhaZ 05616 Poly(3-hydroxyalkanoate) depolymerase 283 99 100 100 99 99 99 97 95
PhaC2 05611 Poly(R)-hydroxyalkanoic acid synthase 559 99 99 99 96 99 100 99 95
PhaD 05606 Transcriptional regulator 204 100 99 96 99 99 99 97 95
PhaF 05601 PHA granule associated protein 253 99 100 100 97 99 100 98 94
PhaI 05596 PHA granule associated protein 139 99 100 96 93 96 96 91 91
PhaG 13888 Hydroxyacyl-ACP:CoA transacylase 295 99 99 99 98 99 100 94 89
FabD 00250 malonyl CoA-acyl carrier protein transacylase 312 99 99 100 96 99 100 98 92
FabA 12710 3 hydroxyacyl(decanyl)-ACP dehydratase 171 100 100 100 99 100 100 98 92
FabB 12715 2 -Oxoacyl carrier protein synthase 406 100 99 99 99 99 99 99 99
FabG 23353 3-ketoacyl-(acyl-carrier-protein) reductase 450 99 99 99 96 99 99 95 90
FabG_2 00255 3-oxoacyl-(acyl-carrier-protein) reductase 450 99 100 99 99 100 99 100 99
FabG_3 15924 3-oxoacyl-(acyl-carrier-protein) reductase 450 100 100 100 97 99 99 94 91
FabZ 14589 3-hydroxyacyl-[acyl carrier protein] dehydratase 146 100 100 100 100 100 100 99 95