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Table 2 Composition profiles of phylogenetic groups of bacteria based on 16S rRNA gene sequences from the clone libraries

From: Changes and recovery of soil bacterial communities influenced by biological soil disinfestation as compared with chloropicrin-treatment

Phylum or class Clone library (% of abundance)
Pre-treatment UTC BSD CP UTC-spinach BSD-spinach CP-spinach
Alphaproteobacteria 26.2 17.7 11.6 10.7 30.7 32.9 25.0
Betaproteobacteria 5.9 3.2 4.4 7.1 8.0 3.8 8.8
Gammaproteobacteria 11.9 14.5 8.7 - 14.7 8.9 7.4
Deltaproteobacteria - 1.6 1.4 - 1.3 - -
Acidobacteria 10.7 9.7 - 8.3 9.3 8.9 4.4
Verrucomicrobia - 4.8 - - - - 4.4
Bacteroidetes 13.1 8.1 - - 1.3 10.1 2.9
Planctomycetes 3.6 4.8 2.9 1.2 4.0 6.3 -
Firmicutes (Clostridia) - 1.6 24.6 - - 2.5 -
Firmicutes (Bacilli) 3.6 3.2 34.8 53.6 1.3 3.8 4.4
Gemmatimonadetes 8.3 19.4 7.2 9.5 14.7 7.6 14.7
TM7 5.9 4.8 - - 2.7 6.3 8.8
Actinobacteria 5.9 6.5 - 7.1 9.3 3.8 7.4
Chloroflexi - - - 2.4 2.7 3.8 2.9
Others 4.8 - 4.4 - - 1.3 8.8
  1. -, not detected.