Systematic analysis of the ability of Nitric Oxide donors to dislodge biofilms formed by Salmonella enterica and Escherichia coli O157:H7
© Marvasi et al.; icensee Springer 2014
Received: 31 March 2014
Accepted: 10 April 2014
Published: 5 June 2014
Biofilms in the industrial environment could be problematic. Encased in extracellular polymeric substances, pathogens within biofilms are significantly more resistant to chlorine and other disinfectants. Recent studies suggest that compounds capable of manipulating nitric oxide-mediated signaling in bacteria could induce dispersal of sessile bacteria and provide a foundation for novel approaches to controlling biofilms formed by some microorganisms. In this work, we compared the ability of five nitric oxide donors (molsidomine, MAHMA NONOate, diethylamine NONOate, diethylamine NONOate diethylammonium salt, spermine NONOate) to dislodge biofilms formed by non-typhoidal Salmonella enterica and pathogenic E. coli on plastic and stainless steel surfaces at different temperatures. All five nitric oxide donors induced significant (35-80%) dispersal of biofilms, however, the degree of dispersal and the optimal dispersal conditions varied. MAHMA NONOate and molsidomine were strong dispersants of the Salmonella biofilms formed on polystyrene. Importantly, molsidomine induced dispersal of up to 50% of the pre-formed Salmonella biofilm at 4°C, suggesting that it could be effective even under refrigerated conditions. Biofilms formed by E. coli O157:H7 were also significantly dispersed. Nitric oxide donor molecules were highly active within 6 hours of application. To better understand mode of action of these compounds, we identified Salmonella genomic region recA-hydN, deletion of which led to an insensitivity to the nitric oxide donors.
KeywordsBiofilm control Bacterial signaling Food-borne pathogens Nitric oxide
Every natural wet surface is a substrate for microbial biofilms. These sessile multicellular microbial consortia are embedded within the self-produced extracellular polymeric substances (EPS) (Costerton et al. ; Marvasi et al. ; Solano et al. ; Wingender et al. ). In food handling facilities, biofilms could be particularly problematic. While pathogens do not typically make up the bulk of the biofilms formed in the industrial settings, Salmonella spp, Listeria spp, pathogenic strains of E. coli, Yersinia spp, Pseudomonas spp, Shigella spp, Staphylococcus spp, and Bacillus spp can be found in biofilms on various contact surfaces (Blanpain-Avet et al. ; Shi and Zhu ). Because microbes in biofilms are significantly more resistant to chlorine and other disinfectants (Zhang and Mah ), there is a pressing need to identify compounds capable of controlling biofilms by other means.
A discovery of the nitric oxide’s function in inducing biofilm dispersal led to concerted efforts on the identification of the compounds capable of dislodging biofilms (Landini et al. ; McDougald et al. ). Several disinfectants, antibiotics and messenger molecules have been studied for their ability to disperse biofilms (Barraud et al. ; Barraud et al. ; Barraud et al. [2009a]; Huynh et al. ; McDougald et al. ). Nitric oxide (NO) gas and NO donors are currently used clinically (Regev-Shoshani et al. ). In bacteria and eukaryotes, nitric oxide is a signaling molecule, active at very low concentrations (Gaupels et al. ; Simontacchi et al. ). At low concentrations, it is effective as a biofilm dispersant, functioning as a messenger rather than a generic poison (Barraud et al. ; Barraud et al. [2009a]). Nitric oxide can be delivered to biofilms using NO donor molecules or impregnated onto nanoparticles (Slomberg et al. ; Wang et al. ). The application of NO donors has the same effect on dispersal of biofilms as the direct addition of nitric oxide and is less toxic than the application of the nitric oxide gas (Barraud et al. [2009a]). Over 105 NO donors have been characterized, but only few of them have been tested for controlling industrial biofilms (Wang et al. ). Among these, activity of sodium nitroprusside has been recently characterized in detail. It can produce a flux of nitric oxide of 30 pmol cm−2 s−1, and this can efficiently reduce the adhesion of Staphylococcus aureus, Staphylococcus epidermidis, and E. coli by 96%, 48%, and 88%, respectively (Charville et al. ). Therefore, it appears that nitric oxide could have a universal effect on the dispersal of bacterial biofilm including both Gram-positive and Gram-negative bacteria (Xiong and Liu ).
In this work, we tested the effectiveness of NO donors in dispersal of biofilms formed by common foodborne pathogens (non-typhoidal Salmonella enterica and enterohaemorrhagic E. coli, EHEC) on materials that are common in the food industry. The rationale for this study was based on the reports that the same NO donors have different dispersion potential depending on the bacterial strain, temperature and surface properties (Barraud et al. ; Barraud et al. [2009a]; Charville et al. ; Gilberthorpe and Poole ). Because the ultimate goal of these experiments is to identify commercially available compounds for industrial applications, the following criteria were used to select candidate compounds: 1) low/moderate toxicity; 2) have no more than 0.1% of probable, possible or confirmed human carcinogenicity according to the International Agency for Research on Cancer (IARC); 3) low/moderate cost; 4) commercially availability. Based on these criteria, the following compounds were selected: molsidomine (N- (ethoxycarbonyl)- 3- (4- morpholinyl)- sydnone imine), MAHMA NONOate (6-(2-Hydroxy-1-methyl-2-nitrosohydrazino)-N-methyl-1-hexanamine), spermine NONOate (N-[4-[1-(3-Aminopropyl)-2-hydroxy-2-nitrosohydrazino]butyl]-1,3-propanediamine), diethylamine NONOate diethylammonium salt, and diethylamine NONOate sodium.
Microarray studies have revealed that P. aeruginosa genes involved in adherence are down regulated upon exposure to nitric oxide (Firoved et al. ), and the involvement of NO in regulating biofilm formation and dispersal in P. aeruginosa was also supported by several studies (Barraud et al. ; Barraud et al. [2009a]; Darling and Evans ; Van Alst et al. ). Several genes involved in the production and perception of this signaling molecule have been characterized in Pseudomonas aeruginosa PAO1. The chemotaxis protein BdlA is involved in biofilm dispersion of P. aeruginosa: biofilms formed by the bdlA mutant do not detach when exposed to low doses of NO in continuous-flow cultures (Barraud et al. [2009a]; Petrova and Sauer ). P. aeruginosa nirS and norCB encode a NO2− reductase and NO reductase. A mutation in nirS leads to a reduced biofilm dispersion (Barraud et al. ), while biofilms formed by a NO reductase-deficient strain ΔnorCB did not shift to the planktonic state when exposed to endogenous nitric oxide. No homologs of NirS, NorCB are found in Salmonella. However, when grown anaerobically with nitrate, Salmonella is capable of generating NO after nitrite addition, likely via products of fnr and hmp genes (Gilberthorpe and Poole ). Because the mechanisms of nitric oxide-mediated signaling in Salmonella appear to be distinct from those in P. aeruginosa, this study also attempted to elucidate genes that are potentially involved in these signaling pathways and contribute to biofilm dispersal in Salmonella.
Materials and methods
Bacterial strains and culture media
Escherichia coli EHEC O157:H7 ATCC 43888, Salmonella enterica serotovar Typhimurium ATCC14028, sv. Braenderup 04E01347, Braenderup 04E01556, Braenderup 04E00783, sv. Montevideo LJH519, sv. Javiana ATCC BAA-1593 and sv. Newport C6.3 (Noel et al. ) were used in this study. When a cocktail of Salmonella strains was used, it was a mix of equal volumes of six strains: three strains of the serovar Braenderup (04E01347, 04E01556, 04E00783), sv. Montevideo LJH519, Javiana (ATCC BAA-1593) and Newport (C6.3). pGFP-ON (a strongly fluorescent construct carrying GFP protein expressed from the Salmonella dppA promoter (Noel et al. )) was transformed into the strains of interest by electroporation.
S. Typhimurium A9 is derived from S. Typhimurium ATCC14028 and lacks the genomic region between 2,974,854 and 2,990,668 nt of NC_003197.1 (recA through hydN), which was replaced with a kanamycin-resistance cassette. It was constructed by sequential Datsenko and Wanner mutagenesis as in (Santiviago et al. ).
All strains were maintained as frozen glycerol stocks, and were sub-cultured into Luria Bertani medium with appropriate antibiotics (50 μg mL−1 kanamycin, 100 μg mL−1 ampicillin).
Nitric Oxide donors
All were purchased from Sigma Aldrich (St. Luois, MO, USA). For each compound, 1 mmol L−1 stock solutions were prepared in phosphate-buffered saline, pH 7.3 (PBS, Fisher, Waltham, MA, USA) and aliquots were stored at −80°C. For the essays, serial dilutions were always prepared fresh in ice-cold PBS just before the experiments and used within 5 minutes of their preparation. The biofilm dispersion potential of the five molecules was tested on polystyrene and polypropylene. The ability of molsidomine to disperse biofilms was also tested on stainless steel.
Biofilm formation and dispersal on plastics
Overnight Luria Bertani cultures of Salmonella or E. coli strains were diluted 1:100 in CFA medium as described previously (Teplitski et al. ), and 100 μL of the diluted cultures were aliquoted into wells of 96-well polypropylene and polystyrene plates (Fisher, Waltham, MA, USA). Plates with bacteria were incubated for 24 hours at 37°C inside a Ziploc bag. Upon completion of the incubation, the medium with planktonic bacteria was removed and serial dilutions of nitric oxide donors in PBS (in 200 μL) were added to the wells with biofilms. Dispersal experiments were conducted at 22°C or 4°C for 6 and 24 hours. Dispersal was measured by staining the remaining biofilms with 1% crystal violet in ethanol, as described previously (Merritt et al. ; O’Toole and Kolter ).
In parallel, to validate the staining approach, detachment of cells from biofilms was also measured by directly monitoring the increase of fluorescence of planktonic cells of S. Typhimurium 14028 pGFP-ON using Victor-2 multimode plate reader with a 485 nm/535 nm excitation/emission filter (Perkin Elmer, Waltham, MA, USA).
Effects of selected NO donors on light production by a constitutively luminescent Salmonella strain were characterized as indirect assessments of toxicity of the compounds. Two hundred microliters of Luria Bertani broth inoculated with the overnight, 1:50 diluted culture of S. Typhimurium 14028 pTIM2442 (harboring the luxCDABE driven by a strong constitutive phage λ promoter, Alagely et al., ) were grown in black polystyrene plates (Corning, New York, USA) in presence of serial dilutions of Molsidomine. Molsidomine was diluted in PBS (9.89gL−1) (Fisher Scientific, Waltham, MA, USA) to final concentrations of 10μmolL−1, 10nmolL−1, and 10pmolL−1. PBS was used as a control. Luminescence of S. Typhimurium 14028 pTIM2442 was measured over time using Victor-2 multimode plate reader (Perkin Elmer, Waltham, MA, USA). Each experiment included 12 replicas.
Biofilm formation on stainless steel
Biofilms were formed on the stainless steel culture tube closures (Fisher Scientific, Waltham, MA, USA) essentially as described above for plastics with the following modifications: only dilutions of molsidomine were used, and only 24 hours of contact time was tested. Biofilm dispersal was tested by monitoring fluorescence under a multimode microplate reader equipped with a 485 nm/535 nm excitation/emission filter (Perkin Elmer, Waltham, MA, USA).
Additive effect of the disinfectant SaniDate 12.0 with nitric oxide donors
Biofilms of S. Typhimurium ATCC14028 were set up as above using overnight cultures of the pathogen diluted 1:100 in the CFA medium in wells of 96-well polypropylene plates (Fisher, Waltham, MA, USA). Plates with bacteria were incubated for 24 hours at 37°C inside a Ziploc bag. Upon completion of the incubation, the medium with planktonic bacteria was removed and 10nmolL−1 of Molsidomine or MAHMA nonoate were added to the wells with biofilms. As controls, BPS alone was used. Plates were incubated at 22°C for 24 hours. Upon completion of the incubation, planktonic cells were removed, wells were washed twice with PBS and 200 μL of SaniDade 12.0 (BioSafe System, Hartford, CT, USA) diluted as per manufacturer’s recommendations and were loaded into the wells. The disinfectant was incubated for 10 minutes, after the incubation time, biofilm dispersal was measured by staining the remaining biofilms with 1% crystal violet in ethanol, as described previously (Merritt et al. ; O’Toole and Kolter ). 12 replicas for each experiment were done.
The statistical software JMP (SAS) package was used to infer the One-way ANOVA analysis (p < 0.05). Tukey means separation analysis was inferred in order to group the means.
Biofilm formation on different plastics
More robust biofilms were formed by Salmonella and E. coli strains on polypropylene than on polystyrene (Additional file 1: Figure S1). On polypropylene and polystyrene, S. enterica sv Typhimurium 14028 formed more biofilms under these conditions than E. coli O157:H7 (Additional file 1: Figure S1). Biofilm formation is known to vary depending on the surface, the media used to develop biofilms, as well as the protocol adopted (Kroupitski et al. ; Teplitski et al. ).
Biofilm dispersal by molsidomine
To test whether the decrease in the staining of the attached cells was caused by an increase in the number of planktonic cells, biofilms formed by fluorescent Salmonella 14028 pGFP-ON on polypropylene were treated with molsidomine. Fluorescence of the planktonic and attached cells was measured after 0, 3 and 6 hours of exposure to the nitric oxide donor. The increase in total fluorescence of planktonic cells upon treatment of biofilms with molsidomine was statistically significant (Additional file 1: Table S1), reflecting an increase in detachment at the tested concentrations. Similarly, molsidomine treatment of the Salmonella biofilms formed on stainless steel resulted in ~0.3 log increase in fluorescence of the planktonic cells (data not shown).
The ability of the constitutively luminescent Salmonella construct driven by a phage λ promoter to produce light in the presence of molsidomine was used as an indirect assessment of the toxicity of the compound, and its ability to generally disrupt metabolism or respiration of the bacteria. As shown in Additional file 1: Figure S2, even though modest decrease in luminescence was observed in molsidomine-treated cultures, the reduction of luminescence was not greater than 1-10% of the control.
Dose-dependent biofilm dispersal by diethylamine NONOate diethylammonium
Diethylamine NONOate diethylammonium was most potent at dispersing biofilms on polypropylene following a 6-hours incubation. A strong dispersal of biofilms formed by Salmonella ATCC 14028 on polypropylene was observed (Figure 2). Biofilms formed by E. coli O157:H7 were also dispersed by diethylamine NONOate diethylammonium, but the dispersal was lower when compared with Salmonella. The biofilm formed by the cocktail of six Salmonella outbreak strains formed on polystyrene was also dispersed (Figure 2 and Additional file 1: Table S2 and Additional file 1: Table S3).
The effect of diethylamine NONOate sodium salt hydrate, MAHMA NONOate and spermine NONOate on biofilms
The effect of Spermine NONOate and MAHMA NONOate on preformed biofilm
Probability > F (p = 0.05)*
The recA-hydN genomic region is involved in Salmonella biofilm dispersal
Controlling biofilms on surfaces of clinical and industrial importance has emerged as an important goal. While an impressive toolbox is potentially available to those aiming to prevent microbes from attaching to surfaces and forming biofilms (Campoccia et al. ; Chen et al. ), the approaches for controlling existing biofilms are significantly more limited. A seminal discovery that self-produced nitric oxide acts as a dispersal cue for Pseudomonas aeruginosa biofilms (Barraud et al. ) sparked interest in exploring the use of the NO gas, molecules and nanoparticles capable of releasing it (Landini et al. ; McDougald et al. ). Various nitric oxide generating molecules and nanoparticles can be used effectively to dislodge biofilms formed by Gram-negative P. aeruginosa and E. coli, Gram-Positive Staphylococcus aureus and S. epidermidis (Barraud et al. [2009b]; Cherayil and Antos ; Slomberg et al. ) and prevent attachment of zoospores of the green algae Ulva (Thompson et al. ). However, in some bacteria (Shewanella oneidensis, Vibrio harveyi), perception of NO leads to an increased biofilm formation (Landini et al. ; Plate and Marletta ). Therefore, even though NO is a signal employed by a diversity of organisms, responses to it are not universally conserved. Because of these biological differences in the consequences of NO detection, it is important to establish how and to what extent commercially available nitric oxide donors can be used for controlling biofilms formed by important foodborne bacterial pathogens, known to persist as biofilms in the industrial facilities.
With this study, we focused on the effects of off-the-shelf NO donors on the biofilms formed by seven strains of S. enterica and pathogenic E. coli on surfaces that mimic those found in food processing facilities. The five compounds selected for these tests based on their low potential toxicity, commercial availability and predicted potency demonstrated varying levels of specificity and efficacy. Of the compounds tested, molsidomine and diethylamine NONOate diethylammonium are the most promising as they are capable of dislodging biofilms formed by S. Typhimurium 14028, a cocktail of six Salmonella strains isolated from outbreaks and E. coli O157:H7 under most of the tested conditions. For most of the compounds tested, their highest activity appears to be in the picomolar range, suggesting that their applications could be further optimized for the economical and effective industrial applications. The activity of the compounds in the nano- and picomolar ranges further suggests that NO acts as a potent cue, consistent with previous reports. Low biofilm-dispersing activity of the nitric oxide donors at higher concentrations is, perhaps, not surprising considering that NO can be bactericidal at a concentration of mg L−1 (McDougald et al. ; Miller et al. ), and the methods employed in this study would not necessarily distinguish between live and dead bacteria within an existing biofilm.
Interestingly, some compounds (molsidomine or diethylamine NONOate diethylammonium) were effective at dispersing biofilms under refrigerated conditions (4°C). Temperature is an important factor affecting the dissociation constant. NONOate (s) are very sensitive to temperature: a 1°C change from 37°C can results in an approximate 13% change in NO release (Ramamurthi and Lewis ). Therefore, it is reasonable to hypothesize that when biofilms are exposed to the nitric oxide donors at lower temperatures, they experienced the treatment for a longer period of time, and this increased their potency. The implications of this observation for industrial applications are potentially exciting: the ability of the nitric oxide donors to disperse biofilms at 4°C makes them good candidates for cleaning refrigerated surfaces, common in the food industry and even removing pathogen biofilms from refrigerated foods. While Salmonella and E. coli are thought to be metabolically inactive under these conditions, their populations in biofilms formed on refrigerated foods remain relatively steady over an extended period of time (Kroupitski et al. ). Furthermore, a complement of Salmonella genes that were differentially expressed during biofilm formation on cut lettuce during cold storage has been identified (Kroupitski et al. ), suggesting that even though the cells of these human pathogens are not dividing, physiological processes and gene expression still take place under refrigerated conditions. It would be of great interest to determine whether these specific genes induced in biofilms on foods at 4-8°C could be subject to manipulation by NO. More broadly, it remains to be determined which of the Salmonella genes involved in biofilm formation (Hamilton et al. ; Teplitski et al. ) are subject to regulation by nitric oxide, and – conversely – which of the known Salmonella genes responsive to nitric oxide contribute to the NO-mediated biofilm dispersal (Henard and Vazquez-Torres ; Karlinsey et al. ; Richardson et al. ).
We are grateful to M. McClelland for providing A9 mutant.
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