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Table 1 Identification of the isolates on the basis of conventional and molecular analysis

From: Contribution of target alteration, protection and efflux pump in achieving high ciprofloxacin resistance in Enterobacteriaceae

Isolate ID

Growth characteristics on different differential and selective media

Microscopic characteristics

Media

Appearance

Form

Elevation

Margin

Consistency

Gram-staining

Size

Shape

Arrangement

28N, 26N, CR1, CR2, CR4, CR6, NCX9, MCX14, C6, C49, C79, C84, E8, E23, E29, E34, E36, E37, E40, E41, E42, E56, E58, G2, G3, G4

MAC

DP

C

F

E

D

Gram-negative

S

SR

Single

EMB

BB, GMS

XLD

Y

MCX1, MCX2, MCX3, MCX4, MCX5, MCX6, NCX4

MAC

P

C

R

E

G

M

Rd

EMB

B, DC

XLD

Y

NCX6, MCX10, C1, C67, E33

MAC

LP

C

F

E

D

M

Rd

EMB

B, DC

C

F

E

G

XLD

Y

C

F

E

D

18, 20, 36, 44, 45, 49, 54, 58, 60,68, 74, 77, 81, 84, 94

MAC

Colorless

C

F

E

D

M

Rd

EMB

Color less

C

F

E

G

XLD

Red, BC

C

F

E

D

Isolate ID

Biochemical characteristics

Presumptive organism

ARDRA genotype

Sugar utilization tests

IMViC tests

Oxidase Test

KIA Test

Motility

Gl

Su

La

Indole

MR

VP

Citrate

Slant

Butt

Gas

H2S

28N, 26N, CR1, CR2, CR4, CR6, NCX9, MCX14, C6, C49, C79, C84, E8, E23, E29, E34, E36, E37, E40, E41, E42, E56, E58, G2, G3, G4

+

±

+

+

+

Y

Y

+

+

Escherichia spp.

I

MCX1, MCX2, MCX3, MCX4, MCX5, MCX6, NCX4

+

+

+

+

Y

Y

+

Enterobacter spp.

II

NCX6, MCX10, C1, C67, E33

+

+

+

+

Y

Y

+

Klebsiella spp.

III

18, 20, 36, 44, 45, 49, 54, 58, 60,68, 74, 77, 81, 84, 94

+

+

+

Red

Y

+

Salmonella spp.

IV

  1. Legends for conventional and molecular characteristics: C circular, F flat, R raised, E entire, D dry, G gummy, S short, M medium, SR short rod, Rd rod, GMS green metallic sheen, DP dark pink, BB blue black, Y yellow, P pink, B brown, R red, DC dark centered, LP light pink, Gl glucose, Su sucrose, La lactose, BC black centered
  2. Italics isolates were previously identified in our laboratory