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Table 2 Oligonucleotides used

From: Analysis and application of Bacillus subtilis sortases to anchor recombinant proteins on the cell wall

Name

Sequence (5' to 3')

Description

ON29

GGCCATGGATCC ATGATTCAAAAACGAAAGCGGACAG

5' end of amyQ

ON42

GGCCATGACGTC TTTCTGAACATAAATGGAGACGGAC

3' end of amyQ

ON47

GGCCATGACGTC TTGGAAGCGACAGTTGAGTACG

5' end of yhcR

ON48

GAATAAGATATC TCACGTTCTGGAGGCGCTCCT

3' end of yhcR

ON49

GGCCATGACGTC CGCATGTTTGATATTGAAGAAGC

5' end of yfkN

ON50

AGCAGCGATATC TTATGCCTGATTCGCTCTATTCTG

3' end of yfkN

ON54

GGCCATTTCGAAGACCTCTTTAGCTCCTTGGAAGC

3' end of erm

ON55

GACCTGAATGTGGAACGAGTGGAC

5' end of ywpF

ON56

GGCCATTTCGAACCGACTGTAAAAAGTACAGTCGGCA

3' end of cat

ON57

CGTCTTGATCAGGATACATCTGGC

5' end of yhcT

ON58

GAGAGCCATAAACACCAATAGCCTT

5' end of neo

ON59

GGCCATGAATTC AAAGGAGGAACTCCAGAACGTGAAAAAAGTTATTC

5' end of yhcS

ON60

CTAATACGACTCACTATAGGGAGAGGATCC CGACACCTTTTTCTAAATCA

3' end of yhcS

ON61

GGCCATGAATTC AAAGGAGGAACAACAATGCGCCGGGATCA

5' end of ywpE

ON62

CTAATACGACTCACTATAGGGAGAGGATCC TCTTCGTGCTTCACTCTTGC

3' end of ywpE

ON63

TCTACATCCAGAACAACCTCTGC

5' end of Pspac

ON64

GGCCATAGATCT ATGCGCCGGGATCAAAAAATG

5' end of ywpE

ON65

GGCCATAGATCT ATGAAAAAAGTTATTCCACTATTCATCATTGC

5' end of yhcS

ON66

GGCCATAGATCT AGAATGAAGAAAAGCCGCAGGCACT

3' end of yhcS

ON67

CCAGAGATCT CAAAGGAGGAACTCCAGAACGTGAAAAAAGTTATTC

5' end of yhcS

ON68

AGTAAAGTTATCGGAATCGACTTAG

5' end of dnaK

ON69

CTAATACGACTCACTATAGGGAGAAAAGTATGCAGGAACTGTGAT

3' end of dnaK

  1. Restriction sites used for cloning are underlined