Table 2 CAZymes-encoding genes with significantly increased expression in the transcriptome of B. velezensis CL-4 fermented corn germ meal
From: Comparative genomic and transcriptome analysis of Bacillus velezensis CL-4 fermented corn germ meal
NCBI gene code | EC | CAZy Family | Enzyme description | Log2Fold change |
|---|---|---|---|---|
gene-K4L72_RS06255 | 3.2.1.85 | GH1 | 6-phospho-β-galactosidase | 1.48 |
gene-K4L72_RS04325 | 3.2.1.122 | GH4 | 6-phospho-α-glucosidase | 6.61 |
gene-K4L72_RS15355 | 3.2.1.20 | GH13 | α-glucosidase | 2.13 |
gene-K4L72_RS01625 | 3.2.1.1 | GH13 | α-amylase | 1.94 |
gene-K4L72_RS14170 | 3.2.1.99 | GH43 | Arabinan endo-1,5-α-L-arabinosidase | 2.15 |
gene-K4L72_RS08970 | 3.2.1.37 | GH43 | xylan 1,4-beta-xylosidase | 5.29 |
gene-K4L72_RS19300 | 3.2.1.99 | GH43 | Arabinan endo-1,5-α-L-arabinosidase | 4.58 |
gene-K4L72_RS14125 | 3.2.1.55 | GH51 | α-N-arabinofuranosidase | 2.03 |
gene-K4L72_RS14020 | 3.2.1.55 | GH51 | α-N-arabinofuranosidase | 3.36 |
gene-K4L72_RS19275 | 4.2.2.10 | PL1 | Pectin lyase | 1.18 |
gene-K4L72_RS13250 | 3.1.1.72 | CE6 | Acetyl xylan esterase | 1.18 |
gene-K4L72_RS04250 | 3.1.1.72 | CE4 | Acetyl xylan esterase | 2.19 |
gene-K4L72_RS08580 | 3.1.1.72 | CE4 | Acetyl xylan esterase | 3.09 |
gene-K4L72_RS09050 | 1.14.99.– | AA10 | Copper-dependent lytic polysaccharide monooxygenases (LPMOs) | 1.26 |