Table 3 Results of cya and argH sequencing for identification of NTM species and the similarity percentage of each isolate with the reference strain
From: Molecular identification of nontuberculous mycobacteria using the rpoB, argH and cya genes analysis
Tested isolates | Cya sequencing | Similarity (%) | argH sequencing | Similarity (%) |
|---|---|---|---|---|
NTM361,363,411,419,359 (M. yongonense or M. chimaera) | M. yongonense | 100 | M. yongonense | 100 |
NTM 18,30,90 (M. yongonense or M. chimaera) | M. chimaera | 100 | M. chimaera | 100 |
NTM 329 (M. intracellulare) | M. intracellulare | 99.43 | M. intracellulare | 99.46 |
NTM108,112 (M. kansasii) | M.kansasii | 100 | M.kansasii | 100 |
NTM304 (M.gordonae) | M.gordonae | 99.93 | M.gordonae | 96.94 |
NTM409 (M.chelonae) | M.chelonae | 100 | M.chelonae | 100 |
NTM46,11 (M.abscessus) | M.abscessus subsp. abscessus | 100 | M.abscessus subsp. abscessus | 100 |
NTM7,73 (M.abscessus) | M.abscessus subsp.massiliense | 99.93 | M.abscessus subsp. abscessus | 98.38 |
NTM74,34 (M.Simiae) | M.simiae | 100 | M.simiae | 98.56 |
NTM35 (M. elephantis) | M.elephantis | 100 | M.elephantis | 98 |
NTM87,12,360 (M.fortuitum) | M.fortuitum | 100 | M.fortuitum | 99.28 |
NTM410 (M.farcinogenes) | M.farcinogenes | 100 | M.farcinogenes | 99.28 |
NTM420,32 (M.thermoresistible) | M.thermoresistible | 100 | M.thermoresistible | 100 |