Table 4 Salmonella Kentucky spacer name
CRISPR locus | Spacer namea (position) | Spacer DNA sequence (5′-3′) |
|---|---|---|
1 | Alt1 (1) | AAAAACTAAATCGCAAATAACCAAAAATATCA |
1 | Conc15 (2) | TGGCGATAATGTACGACGAGTTGCCAAAATAT |
1 | Ana3 (3) | ACCAAAACACTGAAAGCCATTCCTCTGGCGTA |
1 | Ber1 (4) | TGACGGACAACGCGGCCAGTTAGTTTTACCTC |
1 | Ken17 (5) | CGCAGCGAAGCGAGGACATAAAAGCATTACGG |
1 | Ken18 (6) | CTGCGCCAGTGCGGTGATATCGTTGCTCATAG |
1 | Ken19 (7) | GCCTACATAGCCGTAAAAGTCGTCCTGACTAA |
1 | Ken20 (8) | TTAATACTGTCAACCAGCGCCCCCTGATTGTC |
1 | Ken37 (9) | TTCGATATGAACGACGCGCAAGCAAAAGAATT |
1 | Ken38 (10) | TTGCAGGCCCTGGTAGTTGACGCTATCGGGGC |
1 | Ken39 (11) | GGCGTTCTGGTTCTGGCGGCTAAGATAAAGGG |
1 | Newp8 (12) | GGGATCAGCACCGACAACCTAAAACCACTGTT |
1 | Chin1var1 (13) | GTTATGAGTTTTGAGCGTTTTGTGCCGTCGCCC |
1 | Ken21* (14) | GCAGCGGCGATACGTGTAAAAATCCCCTGGT |
1 | Ken22* (15) | ATGTGACGATCTGCGGTGGTTACCAGCCAACA |
1 | Ken40 (16) | GCAGCGGCGATACGTGGAAAAAACCCCCTGGT |
1 | Ken41 (17) | AGGTGACGATCTGCGGTGGTTACCAGCCAACA |
1 | Ken42 (18) | GTTATGAGTTTTGAGCGTTTTGTGCCGTCGCC |
1 | Ken50 (19) | TGAGTCTCTATGGTTAGCAATAATGCGCACAT |
1 | Ken51 (20) | CTCTCCAGTTCGGCCAGAAACTCCCTGGTCTG |
1 | Ken52 (21) | GCGCTTTAACGCCCGCTCGCCCCTGAACCCCT |
1 | Ken53 (22) | CTCCTCGCATTTGTGACTTTCTGGATCATCGG |
1 | Ken40var1 (23) | GCAGCGGCGATACGTGGAAAAACCCCCCTGGT |
1 | Ken23* (24) | GGGATCAACACCGACAAACCTAAAACCACTGTT |
1 | Ken24* (25) | GCATCGGCGATATGTGGAAAAAACCCCCTGGTCG |
1 | Ken25* (26) | AAAAACTAAATAAGCAAATAACCAAAAATATCA |
1 | Ken26* (27) | TGAGTCTCTATGGTTAGCAATAATGCGCACATC |
1 | Ken27* (28) | GGCGTTCTGGTTCTGGCGGCTAAGAAAAGGCCG |
1 | Ken28* (29) | GTGGATCATTACCGACATCCTAAAACCACTGTTTC |
2 | EntB0 (1) | GGCTACACGCAAAAATTCCAGTCGTTGGCGCA |
2 | MonB22 (2) | CCAGCCTCCCGTTACGCATATTTGAGGGTTTT |
2 | MonB24 (3) | GCGGCGCTGATTATGATTTCCCGATAATTTAT |
2 | NiaB2 (4) | CTTTCGGGTTGAAAGCAGTAGCACTCATGCCC |
2 | KenB29 (5) | CATTCCGGCGAGACTGAGCAGCGGGCGAACCG |
2 | ParcB2 (6) | GGCCGTCTGCATTGAGCGCAGTTTTAACGCGT |
2 | KenB30 (7) | TACGGATGTGTGACGGAGTCGCGTTTATGGCG |
2 | KenB31 (8) | ACCGTTTCACGGATGAGAGTTGGCGGAAGCGC |
2 | KenB32 (9) | CAGGAATAGACCTCTTTTGCGCTGTGGCTTGC |
2 | CholB4 (10) | TGCGCCACGCCTATACCATCCGAGTTTTGAGC |
2 | BloB2 (11) | AACAAACTGGAGCGAAATTTCGCACATGCCCC |
2 | KenB33 (12) | GTGCGGTTTCTTGCCGAATAGTGCCTCGTACT |
2 | Tho6 (13) | TTCAGAGAATTGCCGCCAATAGAACAGCGCAA |
2 | KenB42 (14) | AGTCTTTCAGTCCATTGGTCTATGATCTCTCG |
2 | KenB43 (15) | ATGATGTATCGGCCATCGCGCCGGGTTATGTT |
2 | KenB28* (16) | AACCAAACTGGAGCGAAATTTCGCACATGCCCCC |
2 | KenB33* (17) | TTCAGAGAATTGCCGCCCATAGACAACCGCAA |
2 | KenB34* (18) | ATGATGTATTCGGCATCGCGCCGGGTTATGTG |
2 | KenB35* (19) | GGCTTCGTGCGCCGCACATCGCAGCGACT |