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Table 2 Bioinformatics analysis of the mo-uvrA and mo-dnaK

From: Identification of unknown acid-resistant genes of oral microbiotas in patients with dental caries using metagenomics analysis

Code

mo-dnaK

mo-uvrA

Seq length (bp)

1956

2826

Sitea(Nt rangeb)

1–83aa (835–398 bp)

1–743aa (382–2936 bp)

G + C %

48.7%

46.9%

Alignmentc

Streptococcus suis

S. pasteurianus ATCC 43,144

Protein(accession No.)

HSPs70 (EGF09631)

ABC transporter protein (WG_0056)

E-Value

0

0

Identities %

438/539 (81%)

2622/2826 (90%)

Putative functiond

Trigger protease-oriented pathways for the elimination

Maintain the pH inside the cell

Throughout

of the damaged polypeptides

The pumping function

Possible transmembrane helicese

0

0

  1. aProtein range (site) of alignment into the known proteins
  2. bNucleotide range (nt range) of the predicted ORF within insert
  3. cMost similar protein, currently identified with blast
  4. dMost similar protein: putative function
  5. eResults from the online server
  6. bp base pair, aa amino acids, score bit score of the alignment using BLAST