Skip to main content

Table 1 Primer sets for amplification of the whole genome of F/98

From: Effect of the selection pressure of vaccine antibodies on evolution of H9N2 avian influenza virus in chickens

Prime name

Prime sequence (5′–3′) of forward primer

Prime sequence (5′-3′) of reverse primer

Length (bp)

PB2

 PB2-1

TATTGGTCTCAGGGAGCGAAAGCAGGTC

ACTGCCTTTATCATGCAGTCATC

1376

 PB2-2

GCAACCGCTATTTTTAGGAAAGC

ATATGGTCTCGTATTAGTAGAAACAAGGTCG

1276

PB1

 PB1-1

AGCAAAAGCAGGCAAACCATTTGAA

GAGGATTGGAGCCCTTCCCACCA

1984

 PB1-2

ATGATGATGGGCATGTTCAACATG

AGTAGAAACAAGGCATTTTTTCA

1120

PA

 PA-1

AGCTAAAGCAGGTACTGATTCAAAA

ATCCATCTTGATTCCGTCAATTC

1316

 PA-2

GGCACCTGATAAAGTTGACTTTGA

AGTAGAAACAAGGTACTTTTTTGGA

1138

HA

TATTCGTCTCAGGGAGCAAAAGCAGGGG

ATATCGTCTCGTATTAGTAGAAACAAGGGTGTTTT

1683

NP

TATTCGTTCTCAGGGAGCAAAAGCAGGGTA

AGTAGAAACAAGGGTATTTTTCTT

1497

NA

TATTGGTCTCAGGGAGCAAAAGCAGGAGT

ATATGGTCTCGTATTAGTAGAAACAAGGAGTTTTT

1417

M

TATTCGTCTCAGGGAGCAAAAGCAGGTAG

ATATCGTCTCGTATTAGTAGAAACAAGGTAGTTTT

982

NS

TATTCGTCTCAGGGAGCAAAAGCAGGGTG

ATATCGTCTCGTATTAGTATAAACAAGGGTGTTTT

844