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Table 1 Strains and plasmids used in this study

From: Identification of a species-specific aminotransferase in Pediococcus acidilactici capable of forming α-aminobutyrate

Strain GenBank acc. no., genotype, relevant properties Source
E. coli   
 TOP10 F- mcrA Δ(mrr-hsdRMS-mcrBC) Φ80lacZΔM15 Δ lacX74 recA1 araD139 Δ(araleu)7697 galU galK rpsL (StrR) endA1 nupG Invitrogen
 BL21(DE3) F- ompThsdSB(r B m B ) galdcm (DE3) Invitrogen
 BL21/aat E. coli BL21(DE3) harboring pEXP5-CT/aat This study
P. acidilactici   
 FAM 18098 GCA_009808095.1 Agroscope culture collection
 FAM 13473 GCA_009809395.1 Agroscope culture collection
 FAM 13881 GCA_009809715.1 Agroscope culture collection
 FAM 17411 GCA_009809065.1 Agroscope culture collection
 FAM 17418 GCA_009809885.1 Agroscope culture collection
 FAM 17422 GCA_009808325.1 Agroscope culture collection
 DSM 20284T GCA_000146325.1 German collection of microorganisms and cell cultures
 FAM 18987 GCA_009809575.1 Agroscope culture collection
 FAM 19460 GCA_009809605.1 Agroscope culture collection
 FAM 20559 GCA_009808215.1 Agroscope culture collection
P. pentosaceus   
 FAM 13073 GCA_009809665.1 Agroscope Culture Collection
 FAM 17622 GCA_009809195.1 Agroscope culture collection
 FAM 18813 GCA_009808845.1 Agroscope culture collection
 FAM 19080 GCA_009809425.1 Agroscope culture collection
 FAM 19132 GCA_009809595.1 Agroscope culture collection
 FAM 19144 GCA_005864405.1 Agroscope culture collection
 FAM 19169 GCA_009808085.1 Agroscope culture collection
 FAM 20650 GCA_009808815.1 Agroscope culture collection
 DSM 20336T GCA_001437285.1 German collection of microorganisms and cell cultures
Plasmids   
 pEXP5-CT/TOPO E. coli cloning vector, Ampr Invitrogen
 pEXP5-CT/aat Plasmid expressing the aminotransferase gene aat from FAM18098, Ampr This study
  1. T: type strain