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Table 3 Statistics of reads that mapped to Hafnia alvei H4 genome per sample analysed

From: Effect of the luxI/R gene on AHL-signaling molecules and QS regulatory mechanism in Hafnia alvei H4

Sample

W12-1

W12-2

W12-3

IR-1

IR-2

IR-3

Total mapped reads (%)

98.73

98.7

98.88

98.8

98.81

98.82

Uniquely mapped reads (%)

97.81

97.84

98.02

97.95

98.09

98.16

RNA integrity number (RIN)

9.9

8.1

9.8

9.4

8.8

9.8

  1. Samples W12-1, W12-2, W12-3 and IR-1, IR-2 and IR-3 represent biological replicates for RNA isolated from the H4 mutant at OD600 = 1.7
  2. OD optical density, IR LuxIR gene mutant, W wild-type