Skip to main content

Table 2 Homology of annotated open reading frames in the 11.1-kb DNA region analyzed

From: Identification and characterization of levulinyl-CoA synthetase from Pseudomonas citronellolis, which differs phylogenetically from LvaE of Pseudomonas putida

ORF Homologous protein
  Length (aa) Probable function Protein Source Identity (aa %) Accession no.
PCLA_07f0384 323 Porphobilinogen synthesis 5-Aminolevulinic acid dehydratase Pseudomonas citronellolis 100 WP_074983815
    5-Aminolevulinic acid dehydratase (hemB) Pseudomonas putida KT2440 93 PP_2913
PCLA_07r0385a 548 Organic acid transport Cation/acetate symporter (ActP) Pseudomonas citronellolis 99 WP_074983813
    Acetate permease (ActP-II) Pseudomonas putida KT2440 64 PP_2797 (LvaG)
PCLA_07r0386a 72 Unknown DFU485 domain-containing protein Pseudomonas citronellolis 100 WP_074983811
    Hypothetical protein Pseudomonas putida KT2440 31 PP_2796 (LvaF)
PCLA_07r0387a 531 Levulinyl-CoA synthetase Long-chain fatty acid-CoA ligase Pseudomonas citronellolis 99 WP_074983808
    Medium-chain fatty acid-CoA ligase Pseudomonas putida KT2440 39
35
PP_0763, PP_2795 (LvaE)
PCLA_07r0389a 624 Levulinate catabolism operon regulator Propionate catabolism operon regulatory protein (PrpR) Pseudomonas citronellolis 100 WP_083426835
    sigma54-dependent sensory box protein Pseudomonas putida KT2440 52 PP_2790 (LvaR)
PCLA_07f0390 352 Phosphotransferase family protein Phosphotransferase family protein Pseudomonas citronellolis 100 WP_074983804
    Aminoglycoside phospho transferase Pseudomonas putida KT2440 59 PP_2791 (LvaA)
PCLA_07f0393 218 Phosphatase family protein Histidine phosphatase family protein Pseudomonas citronellolis 99 WP_074983800
    Alpha-ribazole-5′-phosphate phosphatase Pseudomonas putida KT2440 32 PP_1680
PCLA_07f0394 301 Acyl-CoA dehydrogenase Acyl-CoA dehydrogenase Pseudomonas citronellolis 100 WP_074983798
    Acyl-CoA dehydrogenase Pseudomonas putida KT2440 78 PP_2793 (LvaC)
PCLA_07f0396 255 Short-chain dehydrogenase reductase (SDR) SDR family NAD(P)-dependent oxidoreductase Pseudomonas citronellolis 100 WP_074983796
    SDR family oxidoreductase Pseudomonas putida KT2440 67 PP_2794 (LvaD)
  1. aORFs are encoded in the complementary strand