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Table 2 The novel putative xylanase sequences discovered in the annotation of the metagenomic sequence dataset

From: Cloning of novel bacterial xylanases from lignocellulose-enriched compost metagenomic libraries

Library

Sequence

GenBank ID

Domain organization of xylanase

FOS-37 °C-CEL

XYL1

MF171170

[GH11]-[CBM60]

XYL3

MF171171

[GH11]-[CBM60]

XYL7

MF171172

[GH11]-[CBM60]

XYL11

MF171173

[GH11]-[CBM60]

XYL12

MF171174

[GH11]-[CBM60]

XYL13

 A

MF171176

[GH30]

 B

MF171175

[GH11]-[CBM64]

XYL18

MF171177

[GH10]

XYL19

MF171178

[GH11]-[CBM60]

XYL21

MF171179

[GH10]-[FN3]-[FN3]-[CBM2]

FOS-50 °C-CEL

XYL25

MF171180

[GH11]-[CBM2]

XYL32

MF171181

[GH8]

XYL35

MF171182

[GH11]

XYL38

MF171183

[GH10]

PLA-50 °C-CEL

XYL40

MF171184

[GH11]-[CBM60]

Unassigned sequence

Contig. 56

MF171165

[GH11]-[CBM60]

Contig. 74

MF171166

[CADG]-[GH10]-[CBM6]-[CBM22]-[CBM22]

Contig. 228

MF171167

[GH10]-[CBM2] (partial)

Contig. 1219

MF171168

[GH11]-[CBM60]

Contig. 1238

MF171169

[GH11]

  1. Xylanase domain structure is indicated using the abbreviations of families of glycosyl hydrolases (GH) and carbohydrate-binding modules (CBMs) in brackets. The genes selected for subcloning and further study are indicated in italics
  2. [CADG] cadherin-like domain