Table 1 Genomic features and GABA yields of the lactobacilli strains used in this study
From: Genomic insights into a robust gamma-aminobutyric acid-producer Lactobacillus brevis CD0817
Lactobacilli strains | Size (Mb) | GC content (%) | No. of protein-coding gene | No. of plasmid | GenBank/RefSeq accession number | GABA yield (g/L) | References |
|---|---|---|---|---|---|---|---|
L. brevis CD0817 | 3.10 | 50.35 | 2990 | 4 | CP032931.1 | 252 | This study |
L. brevis ATCC 367 | 2.34 | 46.04 | 2180 | 2 | NC_008497.1 | NA | Makarova et al. (2006) |
L. brevis KB290 | 2.59 | 45.57 | 2457 | 9 | NC_020819.1 | NA | Fukao et al. (2013) |
L. brevis NPS-QW-145 | 2.55 | 45.80 | 2391 | 0 | NZ_CP015398.1 | 25.83 | Wu et al. (2015) |
L. brevis TMW 1.2112 | 2.67 | 45.72 | 2338 | 5 | NZ_CP016797.1 | NA | Fraunhofer et al. (2018) |
L. brevis TMW 1.2113 | 2.67 | 45.70 | 2321 | 4 | NZ_CP019750.1 | NA | NA |
L. brevis TMW 1.2108 | 2.92 | 45.27 | 2738 | 8 | NZ_CP019734.1 | NA | NA |
L. brevis TMW 1.2111 | 2.88 | 45.31 | 2508 | 6 | NZ_CP019743.1 | NA | NA |
L. brevis 100D8 | 2.48 | 45.75 | 2355 | 3 | NZ_CP015338.1 | NA | NA |
L. brevis SRCM101174 | 2.57 | 45.59 | 2474 | 5 | NZ_CP021478.1 | NA | NA |
L. brevis SRCM101106 | 2.55 | 45.60 | 2421 | 4 | NZ_CP021672.1 | NA | NA |
L. brevis BDGP6 | 2.79 | 45.60 | 2679 | 0 | NZ_CP024635.1 | NA | NA |
L. brevis ZLB004 | 2.66 | 45.61 | 2420 | 5 | NZ_CP021456.1 | NA | NA |
L. brevis LMT1-73 | 2.53 | 45.89 | 2347 | 2 | NZ_CP033885.1 | NA | NA |
L. brevis NCTC13768 | 2.49 | 46.00 | 2356 | 0 | NZ_LS483405.1 | NA | NA |
L. brevis BSO 464 | 2.72 | 45.46 | 2606 | 8 | CP005977.1 | NA | Bergsveinson et al. (2015) |
L. brevis CGMCC 1306 | NA | NA | NA | NA | NA | 76.36 | Fan et al. (2012) |
L. brevis HYE1 | NA | NA | NA | NA | NA | 1.93 | Lim et al. (2017) |
L. brevis 877G | NA | NA | NA | NA | NA | 1.91 | Seo et al. (2013) |
L. brevis IFO 12005 | NA | NA | NA | NA | NA | 1.05 | Yokoyama et al. (2002) |
L. brevis OPK-3 | NA | NA | NA | NA | NA | 2.02 | Park and Oh (2007) |
L. paracasei NFRI 7415 | NA | NA | NA | NA | NA | 31.14 | Komatsuzaki et al. (2008) |
L. plantrarum WCFS1 | 3.35 | 44.45 | 3063 | 3 | NC_004567.2 | NA | Kleerebezem et al. (2003) |
L. paraplantarum L-ZS9 | 3.14 | 44.00 | 2835 | 0 | NZ_CP013130.1 | NA | Liu and Li (2016) |
L. reuteri TD1 | 2.15 | 38.80 | 1890 | 0 | NC_021872.1 | NA | Leonard et al. (2014) |
L. fermentum F-6 | 2.06 | 51.70 | 1874 | 0 | NC_021235.1 | NA | Sun et al. (2015b) |
L. buchneri NRRL B-30929 | 2.59 | 44.21 | 2368 | 3 | NC_015420.1 | NA | Liu et al. (2011) |
L. oris J-1 | 3.24 | 51.36 | 2868 | 2 | CP014787.1 | NA | NA |