Active bacterial communities of pig fecal microbiota transplantation suspension prepared and preserved under different conditions

Lin, Chunhui; Wan, Jiajia; Lu, Yang; Zhang, He; Chen, Xue; Su, Yong; Zhu, Weiyun

doi:10.1186/s13568-019-0787-4

AMB Express

Table 3 Relative abundances of active microbial OTUs that were significant different among all groups

From: Active bacterial communities of pig fecal microbiota transplantation suspension prepared and preserved under different conditions

Item	SF	AE	AN	AN-CR	SEM	P value	Annotation
OTU137	8.87^a	6.93^b	4.82^c	6.24^b	0.46	0.001	s__Lactobacillus johnsonii
OTU87	5.14^a	1.43^b	0.66^c	0.77^c	0.52	0.000	s__Lactobacillus coleohominis
OTU33	2.88^b	6.81^a	5.11^a	6.55^a	0.51	0.007	f__Ruminococcaceae
OTU43	2.55^a	1.24^b	0.61^c	0.87^bc	0.22	0.000	o__Clostridiales
OTU118	2.38^a	0.72^b	1.03^b	0.89^b	0.20	0.001	g__Aquabacterium
OTU164	2.02^b	3.27^a	1.77^b	2.26^b	0.20	0.004	f__Peptostreptococcaceae
OTU143	1.96^c	5.10^a	3.72^b	4.71^ab	0.39	0.008	f__Prevotellaceae
OTU234	1.76^a	0.77^b	0.79^b	0.39^b	0.16	0.002	g__Helicobacter
OTU244	1.64^a	0.01^b	0.01^b	0.00^b	0.20	0.000	s__Parabacteroides merdae
OTU69	1.56^a	0.35^b	0.15^b	0.20^b	0.17	0.000	g__Ruminiclostridium
OTU30	0.70^b	1.79^a	0.95^b	1.09^b	0.14	0.009	g__[Eubacterium] ventriosum group
OTU144	0.35^a	0.14^b	0.17^b	0.17^b	0.03	0.028	g__Parabacteroides
OTU48	0.39^a	0.40^a	0.14^b	0.15^b	0.04	0.002	o__Clostridiales
OTU92	0.30^c	2.23^ab	1.58^b	2.42^a	0.26	0.004	g__Anaerofilum
OTU158	0.29^c	0.65^bc	1.06^ab	1.52^a	0.16	0.018	s__[Pseudomonas] geniculata
OTU36	0.22^a	0.07^b	0.06^b	0.05	0.02	0.003	f__Lachnospiraceae
OTU230	0.35^b	1.01^a	0.79^a	1.00^a	0.09	0.009	f__Ruminococcaceae
OTU58	0.19^a	0.08^b	0.03^c	0.03^c	0.02	0.000	g__Allisonella
OTU251	0.10^a	0.02^b	0.02^b	0.01^b	0.01	0.007	o__Bacteroidales
OTU240	0.12^a	0.09^a	0.01^b	0.01^b	0.02	0.007	f__Prevotellaceae
OTU6	0.11^a	0.07^ab	0.02^b	0.02^b	0.01	0.030	g__Howardella
OTU202	0.09^b	0.16^b	0.70^a	0.42^ab	0.09	0.036	g__Alloprevotella
OTU171	0.08^ab	0.03^c	0.10^a	0.06^bc	0.01	0.005	f__Ruminococcaceae
OTU88	0.09^b	0.05^b	0.14^a	0.06^b	0.01	0.006	f__Peptococcaceae
OTU275	0.08^ab	0.09^a	0.07^b	0.06^b	0.01	0.025	f__Prevotellaceae
OTU146	0.08^a	0.01^b	0.02^b	0.03^b	0.01	0.004	g__Alloprevotella
OTU170	0.07^a	0.01^b	0.01^b	0.00^b	0.01	0.000	g__[Eubacterium] coprostanoligenes group
OTU49	0.07^a	0.03^b	0.01^c	0.01^c	0.01	0.001	f__Ruminococcaceae
OTU84	0.06^c	0.10^bc	0.13^b	0.20^a	0.02	0.007	g__[Eubacterium] coprostanoligenes group
OTU226	0.04^a	0.01^b	0.01^b	0.01^b	0.00	0.017	g__Oscillibacter
OTU108	0.04^b	0.16^a	0.16^a	0.24^a	0.02	0.016	f__Prevotellaceae
OTU285	0.05^c	0.08^c	0.25^a	0.17^b	0.03	0.002	g__Alistipes
OTU210	0.05^a	0.01^c	0.03^b	0.01^c	0.01	0.000	g__Terrisporobacter
OTU272	0.04^ab	0.02^b	0.06^a	0.05^a	0.01	0.024	s__Bacteroides eggerthii
OTU291	0.03^a	0.01^b	0.02^ab	0.01^b	0.00	0.025	g__Fusicatenibacter
OTU183	0.03^b	0.09^a	0.09^a	0.05^b	0.01	0.011	f__Ruminococcaceae
OTU106	0.04^a	0.02^b	0.02^b	0.01^b	0.00	0.016	f__Prevotellaceae
OTU225	0.02^a	0.00^c	0.01^b	0.00^c	0.00	0.000	g__[Eubacterium] coprostanoligenes group
OTU242	0.02^c	0.05^bc	0.11^a	0.07^b	0.01	0.003	s__Bacteroides chinchillae
OTU55	0.03^a	0.00^b	0.00^b	0.00^b	0.00	0.003	f__Ruminococcaceae
OTU286	0.01^b	0.02^ab	0.08^a	0.04^ab	0.01	0.028	o__Gastranaerophilales
OTU280	0.02^b	0.05^b	0.13^a	0.07^ab	0.01	0.032	g__Prevotella
OTU95	0.01^c	0.03^bc	0.08^a	0.06^ab	0.01	0.010	g__Candidatus Captivus
OTU167	0.01^a	0.00^b	0.00^b	0.00^b	0.00	0.014	g__Ruminiclostridium
OTU73	0.02^a	0.00^b	0.00^b	0.00^b	0.00	0.000	g__[Eubacterium] ruminantium group
OTU3	0.02^c	0.16^b	0.32^a	0.18^b	0.03	0.003	f__Ruminococcaceae
OTU77	0.02^a	0.00^b	0.00^b	0.00^b	0.00	0.001	f__Ruminococcaceae
OTU181	0.01^b	0.01^b	0.03^a	0.02^ab	0.00	0.046	g__Clostridium sensu stricto
OTU200	0.01^b	0.02^a	0.01^b	0.01^b	0.00	0.027	g__Alloprevotella
OTU120	0.01^b	0.02^b	0.06^a	0.05^a	0.01	0.041	f__Prevotellaceae
OTU32	0.01^c	0.10^b	0.09^b	0.17^a	0.02	0.009	f__Erysipelotrichaceae
OTU168	0.01^c	0.10^a	0.05^bc	0.09^ab	0.01	0.015	g__Oscillospira
OTU150	0.01^a	0.00^b	0.00^b	0.00^b	0.00	0.001	c__Cyanobacteria
OTU229	0.01^a	0.00^b	0.00^b	0.00^b	0.00	0.020	g__Oscillibacter
OTU173	0.00^b	0.00^b	0.04^a	0.02^b	0.01	0.025	f__Ruminococcaceae
OTU236	0.00^b	0.01^b	0.06^a	0.03^ab	0.01	0.019	g__Sutterella
OTU63	0.00^c	0.01^bc	0.03^a	0.02^ab	0.00	0.031	f__Ruminococcaceae
OTU216	0.01^b	0.00^b	0.02^a	0.01^b	0.00	0.041	g__Alloprevotella
OTU257	0.00^b	0.00^b	0.01^a	0.00^b	0.00	0.022	f__Prevotellaceae
OTU289	0.00^b	0.01^b	0.03^a	0.01^b	0.00	0.016	g__Blautia
OTU62	0.00^b	0.00^b	0.01^a	0.00^b	0.00	0.023	g__Ruminococcus
OTU80	0.00^b	0.02^a	0.01^b	0.01^b	0.00	0.012	g__Anaerotruncus
OTU207	0.00^b	0.10^a	0.10^a	0.12^a	0.01	0.001	g__Anaerotruncus
OTU241	0.01^c	0.07^ab	0.04^bc	0.11^a	0.01	0.031	s__Bacteroides uniformis
OTU235	0.00^b	0.00^b	0.02^a	0.01^b	0.00	0.006	s__Parasutterella secunda

Data are expressed as mean and standard error of means (SEM), n = 3. Means within the same row with different superscripts are significantly different from one another
SF sows’ fecal group, AE aerobic group, AN anaerobic group, AN-CR anaerobic-cryopreserved group

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