Table 3 Genes involved in production of ammonia and deamination of amino acids
Coordinates | Strand | Product | Gene name |
|---|---|---|---|
266,921–268,435 | + | Histidine ammonia-lyase | hutH |
318,892–320,310 | − | Putative amidase AmiD |  |
435,365–436,537 | + | Lysine 6-dehydrogenase |  |
535,842–537104 | − | Phenylserine dehydratase |  |
1,039,715–1,040,377 | + | Probable l-serine dehydratase, beta chain | sdaAB |
1,040,392–1,041,300 | + | Probable l-serine dehydratase, alpha chain | sdaAA |
1,101,650–1,102,153 | + | Probable chemoreceptor glutamine deamidase CheD 1 |  |
1,318,421–1,319,788 | − | Guanine deaminase | guaD |
1,430,688–1,431,656 | − | l-Asparaginase |  |
1,547,319–1,548,554 | + | Allantoate deiminase |  |
1,581,552–1,582,922 | + | Ethanolamine ammonia-lyase heavy chain |  |
1,582,932–1,583,942 | + | Ethanolamine ammonia-lyase light chain |  |
1,614,306–1,615,679 | − | NADP-specific glutamate dehydrogenase |  |
1,616,318–1,617,646 | + | Probable d-serine dehydratase |  |
1,804,351–1,805,055 | + | Glucosamine-6-phosphate deaminase |  |
1852010–1852543 | + | Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB |  |
2,097,252–2,098,670 | + | Aspartate ammonia-lyase | aspA |
2,100,543–2,100,845 | + | Urease subunit gamma | ureA |
2,100,861–2,101,229 | + | Urease subunit beta |  |
2,101,226–2,102,941 | + | Urease subunit alpha | ureC |
2,423,272–2,424,252 | − | Meso-diaminopimelate d-dehydrogenase |  |
2,687,063–2,688,808 | − | Adenine deaminase | ade |
2,743,214–2,744,329 | + | Cystathionine beta-lyase MetC |  |
2,850,380–2,851,474 | − | Leucine dehydrogenase |  |
2,897,281–2,898,246 | − | Glutaminase 1 | glsA |
2,913,990–2,915,093 | − | Aminomethyltransferase | gcvT |
3,177,391–3,178,323 | − | Porphobilinogen deaminase |  |
3,406,895–3,408,010 | − | Alanine dehydrogenase | ald |
3,539,367–3,540,581 | − | Diaminopropionate ammonia-lyase |  |
3,564,845–3,566,089 | − | Catabolic NAD-specific glutamate dehydrogenase RocG |  |
3,575,261–3,576,433 | + | Cystathionine beta-lyase PatB |  |
3,688,923–3,690,383 | − | Putative amidase AmiC |  |
3,856,477–3,857,190 | − | Glucosamine-6-phosphate deaminase | nagB |
3,991,464–3,993,185 | − | Putative adenine deaminase PTO1085 |  |
4,002,226–4,002,909 | − | Phosphoribosylformylglycinamidine synthase subunit PurQ |  |