Table 2 Summary of bioinformatic analysis for pre and post-capture MinION sequencing runs
From: A novel method for the capture-based purification of whole viral native RNA genomes
Pre-capture | Post-capture | Concentrated post-capture | |
|---|---|---|---|
<DENV1 coverage> | 12.11 | 10.02 | 120.23 |
<DENV1 mapping quality> | 34.31 | 31.60 | 36.99 |
DENV1 error read rate (%) | 16.49 | 17.61 | 15.27 |
Mapped to DENV1 (%) | 0.63 | 31.35 | 77.47 |
Mapped to human (%) | 77.66 | 14.19 | 6.05 |
Percentage of DENV1 genome recovered ≥ 15× coverage (%) | 7.05 | 27.45 | 99.91 |
Purification factor (fold) | 272 | 1580 | |