From: Genetic algorithm with a crossover elitist preservation mechanism for protein–ligand docking
CEPGA | LGA | GA | SODOCK | ABC | |
---|---|---|---|---|---|
3ptb | |||||
CEPGA | – | 0.012 | 0.004 | 0.028 | 0.006 |
LGA | 0.988 | – | 0.008 | 0.563 | 0.225 |
GA | 0.996 | 0.992 | – | 0.995 | 0.688 |
SODOCK | 0.972 | 0.437 | 0.005 | – | 0.100 |
ABC | 0.994 | 0.775 | 0.312 | 0.900 | – |
1aha | |||||
CEPGA | – | 0.519 | 0.402 | 0.124 | 0.105 |
LGA | 0.481 | – | 0.036 | 0.017 | 0.004 |
GA | 0.598 | 0.964 | – | 0.342 | 0.260 |
SODOCK | 0.976 | 0.983 | 0.658 | – | 0.470 |
ABC | 0.895 | 0.996 | 0.740 | 0.530 | – |
3hvt | |||||
CEPGA | – | 0.035 | 0.007 | 0.023 | 0.013 |
LGA | 0.965 | – | 0.205 | 0.324 | 0.150 |
GA | 0.993 | 0.795 | – | 0.778 | 0.437 |
SODOCK | 0.977 | 0.676 | 0.222 | – | 0.215 |
ABC | 0.987 | 0.850 | 0.463 | 0.585 | – |
1phg | |||||
CEPGA | – | 0.036 | 0.008 | 0.041 | 0.017 |
LGA | 0.964 | – | 0.016 | 0.624 | 0.450 |
GA | 0.992 | 0.984 | – | 0.988 | 0.537 |
SODOCK | 0.959 | 0.376 | 0.012 | – | 0.215 |
ABC | 0.983 | 0.550 | 0.463 | 0.785 | – |
2mcp | |||||
CEPGA | – | 0.013 | 0.004 | 0.002 | 0.003 |
LGA | 0.987 | – | 0.203 | 0.182 | 0.224 |
GA | 0.996 | 0.797 | – | 0.492 | 0.610 |
SODOCK | 0.997 | 0.818 | 0.508 | – | 0.640 |
ABC | 0.995 | 0.776 | 0.390 | 0.360 | – |
1stp | |||||
CEPGA | – | 0.034 | 0.007 | 0.042 | 0.013 |
LGA | 0.964 | – | 0.009 | 0.624 | 0.450 |
GA | 0.993 | 0.991 | – | 0.992 | 0.487 |
SODOCK | 0.958 | 0.376 | 0.008 | – | 0.215 |
ABC | 0.987 | 0.550 | 0.513 | 0.785 | – |
6rnt | |||||
CEPGA | – | 0.035 | 0.008 | 0.029 | 0.010 |
LGA | 0.965 | – | 0.018 | 0.368 | 0.127 |
GA | 0.992 | 0.982 | – | 0.695 | 0.588 |
SODOCK | 0.971 | 0.632 | 0.305 | – | 0.404 |
ABC | 0.990 | 0.873 | 0.412 | 0.496 | – |
4dfr | |||||
CEPGA | – | 0.015 | 0.005 | 0.011 | 0.008 |
LGA | 0.985 | – | 0.009 | 0.337 | 0.115 |
GA | 0.995 | 0.991 | – | 0.986 | 0.685 |
SODOCK | 0.989 | 0.663 | 0.014 | – | 0.142 |
ABC | 0.992 | 0.885 | 0.315 | 0.858 | – |
1ets | |||||
CEPGA | – | 0.025 | 0.009 | 0.015 | 0.018 |
LGA | 0.975 | – | 0.018 | 0.063 | 0.127 |
GA | 0.991 | 0.982 | – | 0.595 | 0.688 |
SODOCK | 0.985 | 0.937 | 0.405 | – | 0.504 |
ABC | 0.982 | 0.873 | 0.312 | 0.496 | – |
1hri | |||||
CEPGA | – | 0.038 | 0.002 | 0.040 | 0.015 |
LGA | 0.962 | – | 0.014 | 0.723 | 0.151 |
GA | 0.998 | 0.986 | – | 0.982 | 0.637 |
SODOCK | 0.960 | 0.277 | 0.012 | – | 0.020 |
ABC | 0.985 | 0.849 | 0.363 | 0.980 | – |
1hvr | |||||
CEPGA | – | 0.043 | 0.005 | 0.011 | 0.009 |
LGA | 0.957 | – | 0.038 | 0.177 | 0.044 |
GA | 0.995 | 0.962 | – | 0.942 | 0.565 |
SODOCK | 0.989 | 0.823 | 0.058 | – | 0.168 |
ABC | 0.991 | 0.956 | 0.435 | 0.832 | – |
4hmg | |||||
CEPGA | – | 0.020 | 0.005 | 0.017 | 0.010 |
LGA | 0.980 | – | 0.008 | 0.417 | 0.214 |
GA | 0.995 | 0.992 | – | 0.988 | 0.900 |
SODOCK | 0.983 | 0.583 | 0.012 | – | 0.240 |
ABC | 0.990 | 0.786 | 0.100 | 0.760 | – |
1cdg | |||||
CEPGA | – | 0.017 | 0.006 | 0.044 | 0.005 |
LGA | 0.983 | – | 0.117 | 0.763 | 0.105 |
GA | 0.994 | 0.883 | – | 0.985 | 0.408 |
SODOCK | 0.956 | 0.237 | 0.015 | – | 0.012 |
ABC | 0.995 | 0.895 | 0.592 | 0.988 | – |
1htf | |||||
CEPGA | – | 0.148 | 0.023 | 0.640 | 0.015 |
LGA | 0.852 | – | 0.027 | 0.883 | 0.151 |
GA | 0.977 | 0.973 | – | 0.987 | 0.637 |
SODOCK | 0.360 | 0.127 | 0.013 | – | 0.017 |
ABC | 0.985 | 0.849 | 0.363 | 0.983 | – |
1glq | |||||
CEPGA | – | 0.045 | 0.009 | 0.049 | 0.042 |
LGA | 0.955 | – | 0.018 | 0.163 | 0.227 |
GA | 0.991 | 0.982 | – | 0.695 | 0.788 |
SODOCK | 0.951 | 0.837 | 0.305 | – | 0.704 |
ABC | 0.958 | 0.773 | 0.212 | 0.296 | – |
1tmn | |||||
CEPGA | – | 0.317 | 0.008 | 0.744 | 0.095 |
LGA | 0.683 | – | 0.217 | 0.763 | 0.105 |
GA | 0.992 | 0.783 | – | 0.905 | 0.408 |
SODOCK | 0.256 | 0.237 | 0.005 | – | 0.012 |
ABC | 0.995 | 0.895 | 0.592 | 0.988 | – |