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Table 2 The five criteria for selecting the amino acid positions for mutagenesis

From: Thermostabilization of the uronate dehydrogenase from Agrobacterium tumefaciens by semi-rational design

Criterion

Amino acids

B factor >25 Å2

K4, Q14, R17, E21, A24, P25, M26, E28, S36, P37, L38, D39, P40, A41, G42, P43, N44, E45, E46, Q49, A63, P79, E81, H101, G134, F154, C166, T167, P168, E169, N171, F180, S181, E190, H218, G223, K227, R235, H236, T238, E239, T240, T241, P242, P243, P244

Location

K4, M26, P37, L38, D39, P40, A41, G42, P43, N44, E45, A63, P79, E81, H101, T167, P168, E169, N171, F180, E190, K227, H236, T238, E239, P242, P243, P244

Occurrence in thermostable proteins

K4, M26, L38, D39, A41, G42, N44, E45, A63, E81, H101, T167, E169, N171, F180, E190, K227, H236, T238, E239

Conservation

M26, L38, D39, A41, G42, N44, A63, E81, H101, E169, N171, F180, E190, K227, H236, T238, E239

Part of hydrogen bonding network

L38, A41, E81, H101, H236, E239