TY - JOUR AU - Badieyan, S. AU - Bevan, D. R. AU - Zhang, C. PY - 2012 DA - 2012// TI - Study and design of stability in GH5 cellulases JO - Biotechnol Bioeng VL - 109 UR - https://doi.org/10.1002/bit.23280 DO - 10.1002/bit.23280 ID - Badieyan2012 ER - TY - JOUR AU - Balaa, B. A. AU - Brijs, K. AU - Gebruers, K. AU - Vandenhaute, J. AU - Wouters, J. AU - Housen, I. PY - 2009 DA - 2009// TI - Xylanase XYL1p from Scytalidium acidophilum: site-directed mutagenesis and acidophilic adaptation JO - Bioresour Technol VL - 100 UR - https://doi.org/10.1016/j.biortech.2009.06.111 DO - 10.1016/j.biortech.2009.06.111 ID - Balaa2009 ER - TY - JOUR AU - Chen, Z. F. AU - Zhang, H. M. AU - Wang, J. Q. AU - Tang, C. D. AU - Wu, J. AU - Wu, M. C. PY - 2013 DA - 2013// TI - Engineering the thermostability of a xylanase from Aspergillus oryzae by an enhancement of the interactions between the N-terminus extension and the β-sheet A2 of the enzyme JO - Biotechnol Lett VL - 35 UR - https://doi.org/10.1007/s10529-013-1298-z DO - 10.1007/s10529-013-1298-z ID - Chen2013 ER - TY - JOUR AU - Dong, Y. H. AU - Li, J. F. AU - Hu, D. AU - Yin, X. AU - Wang, C. J. AU - Tang, S. H. AU - Wu, M. C. PY - 2016 DA - 2016// TI - Replacing a piece of loop-structure in the substrate-binding groove of Aspergillus usamii β-mannanase, AuMan5A, to improve its enzymatic properties by rational design JO - Appl Microbiol Biotechnol VL - 100 UR - https://doi.org/10.1007/s00253-015-7224-7 DO - 10.1007/s00253-015-7224-7 ID - Dong2016 ER - TY - JOUR AU - Dumon, C. AU - Varvak, A. AU - Wall, M. A. AU - Flint, J. E. AU - Lewis, R. J. AU - Lakey, J. H. AU - Morland, C. AU - Luginbühl, P. AU - Healey, S. AU - Todaro, T. AU - DeSantis, G. AU - Sun, M. AU - Parra-Gessert, L. AU - Tan, X. AU - Weiner, D. P. AU - Gilbert, H. J. PY - 2008 DA - 2008// TI - Engineering hyperthermostability into a GH11 xylanase is mediated by subtle changes to protein structure JO - J Biol Chem VL - 283 UR - https://doi.org/10.1074/jbc.M800936200 DO - 10.1074/jbc.M800936200 ID - Dumon2008 ER - TY - JOUR AU - Fernández, L. AU - Jiao, N. AU - Soni, P. AU - Gumulya, Y. AU - Oliveira, L. G. AU - Reetz, M. T. PY - 2010 DA - 2010// TI - An efficient method for mutant library creation in Pichia pastoris useful in directed evolution JO - Biocatal Biotransfor VL - 28 UR - https://doi.org/10.3109/10242420903505834 DO - 10.3109/10242420903505834 ID - Fernández2010 ER - TY - JOUR AU - Gao, S. J. AU - Wang, J. Q. AU - Wu, M. C. AU - Zhang, H. M. AU - Yin, X. AU - Li, J. F. PY - 2013 DA - 2013// TI - Engineering hyperthermostability into a mesophilic family 11 xylanase from Aspergillus oryzae by in silico design of N-terminus substitution JO - Biotechnol Bioeng VL - 110 UR - https://doi.org/10.1002/bit.24768 DO - 10.1002/bit.24768 ID - Gao2013 ER - TY - JOUR AU - Hakulinen, N. AU - Turunen, O. AU - Jӓnis, J. AU - Leisola, M. AU - Rouvinen, J. PY - 2003 DA - 2003// TI - Three-dimensional structures of thermophilic β-1,4-xylanases from Chaetomium thermophilum and Nonomuraea flexuosa: comparison of twelve xylanases in relation to their thermal stability JO - Eur J Biochem VL - 270 UR - https://doi.org/10.1046/j.1432-1033.2003.03496.x DO - 10.1046/j.1432-1033.2003.03496.x ID - Hakulinen2003 ER - TY - JOUR AU - Irfan, M. AU - Guler, H. I. AU - Ozer, A. AU - Sapmaz, M. T. AU - Belduz, A. O. AU - Hasan, F. AU - Shah, A. A. PY - 2016 DA - 2016// TI - C-Terminal proline-rich sequence broadens the optimal temperature and pH ranges of recombinant xylanase from Geobacillus thermodenitrificans C5 JO - Enzyme Microb Technol VL - 91 UR - https://doi.org/10.1016/j.enzmictec.2016.05.012 DO - 10.1016/j.enzmictec.2016.05.012 ID - Irfan2016 ER - TY - JOUR AU - Jaenicke, R. AU - Böhm, G. PY - 1998 DA - 1998// TI - The stability of proteins in extreme environments JO - Curr Opin Struct Biol VL - 8 UR - https://doi.org/10.1016/S0959-440X(98)80094-8 DO - 10.1016/S0959-440X(98)80094-8 ID - Jaenicke1998 ER - TY - JOUR AU - Jang, M. K. AU - Lee, S. W. AU - Lee, D. G. AU - Kim, N. Y. AU - Yu, K. H. AU - Jang, H. J. AU - Kim, S. AU - Kim, A. AU - Lee, S. H. PY - 2010 DA - 2010// TI - Enhancement of the thermostability of a recombinant β-agarase, AgaB, from Zobellia galactanivorans by random mutagenesis JO - Biotechnol Lett VL - 32 UR - https://doi.org/10.1007/s10529-010-0237-5 DO - 10.1007/s10529-010-0237-5 ID - Jang2010 ER - TY - JOUR AU - Joo, J. C. AU - Pack, S. P. AU - Kim, Y. H. AU - Yoo, Y. J. PY - 2011 DA - 2011// TI - Thermostabilization of Bacillus circulans xylanase: computational optimization of unstable residues based on thermal fluctuation analysis JO - J Biotechnol VL - 151 UR - https://doi.org/10.1016/j.jbiotec.2010.10.002 DO - 10.1016/j.jbiotec.2010.10.002 ID - Joo2011 ER - TY - JOUR AU - Kataoka, M. AU - Akita, F. AU - Maeno, Y. AU - Inoue, B. AU - Inoue, H. AU - Ishikawa, K. PY - 2014 DA - 2014// TI - Crystal structure of Talaromyces cellulolyticus (formerly known as Acremonium cellulolyticus) GH family 11 xylanase JO - Appl Biochem Biotechnol VL - 174 UR - https://doi.org/10.1007/s12010-014-1130-9 DO - 10.1007/s12010-014-1130-9 ID - Kataoka2014 ER - TY - JOUR AU - Kumar, V. AU - Marín-Navarro, J. AU - Shukla, P. PY - 2016 DA - 2016// TI - Thermostable microbial xylanases for pulp and paper industries: trends, applications and further perspectives JO - World J Microbiol Biotechnol VL - 32 UR - https://doi.org/10.1007/s11274-015-2005-0 DO - 10.1007/s11274-015-2005-0 ID - Kumar2016 ER - TY - JOUR AU - Laemmli, U. K. PY - 1970 DA - 1970// TI - Cleavage of structural proteins during the assembly of the head of bacteriophage T4 JO - Nature VL - 227 UR - https://doi.org/10.1038/227680a0 DO - 10.1038/227680a0 ID - Laemmli1970 ER - TY - JOUR AU - Lassila, J. K. PY - 2010 DA - 2010// TI - Conformational diversity and computational enzyme design JO - Curr Opin Chem Biol VL - 14 UR - https://doi.org/10.1016/j.cbpa.2010.08.010 DO - 10.1016/j.cbpa.2010.08.010 ID - Lassila2010 ER - TY - JOUR AU - Li, H. AU - Murtomäki, L. AU - Leisola, M. AU - Turunen, O. PY - 2012 DA - 2012// TI - The effect of thermostabilising mutations on the pressure stability of Trichoderma reesei GH11 xylanase JO - Protein Eng Des Sel VL - 25 UR - https://doi.org/10.1093/protein/gzs052 DO - 10.1093/protein/gzs052 ID - Li2012 ER - TY - JOUR AU - Li, J. F. AU - Gao, S. J. AU - Liu, X. T. AU - Gong, Y. Y. AU - Chen, Z. F. AU - Wei, X. H. AU - Zhang, H. M. AU - Wu, M. C. PY - 2013 DA - 2013// TI - Modified pPIC9K vector-mediated expression of a family 11 xylanase gene, Aoxyn11A, from Aspergillus oryzae in Pichia pastoris JO - Ann Microbiol VL - 63 UR - https://doi.org/10.1007/s13213-012-0568-7 DO - 10.1007/s13213-012-0568-7 ID - Li2013 ER - TY - JOUR AU - Luo, H. Y. AU - Yang, J. AU - Li, J. AU - Shi, P. J. AU - Huang, H. Q. AU - Bai, Y. G. AU - Fan, Y. L. AU - Yao, B. PY - 2010 DA - 2010// TI - Molecular cloning and characterization of the novel acidic xylanase XYLD from Bispora sp. MEY-1 that is homologous to family 30 glycosyl hydrolases JO - Appl Microbiol Biotechnol VL - 86 UR - https://doi.org/10.1007/s00253-009-2410-0 DO - 10.1007/s00253-009-2410-0 ID - Luo2010 ER - TY - JOUR AU - Madhusudhan, M. S. AU - Webb, B. M. AU - Marti-Renom, M. A. AU - Eswar, N. AU - Sali, A. PY - 2009 DA - 2009// TI - Alignment of multiple protein structures based on sequence and structure features JO - Protein Eng Des Sel VL - 22 UR - https://doi.org/10.1093/protein/gzp040 DO - 10.1093/protein/gzp040 ID - Madhusudhan2009 ER - TY - JOUR AU - Niesen, F. H. AU - Berglund, H. AU - Vedadi, M. PY - 2007 DA - 2007// TI - The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability JO - Nat Protoc VL - 2 UR - https://doi.org/10.1038/nprot.2007.321 DO - 10.1038/nprot.2007.321 ID - Niesen2007 ER - TY - JOUR AU - Payan, F. AU - Leone, P. AU - Porciero, S. AU - Furniss, C. AU - Tahir, T. AU - Williamson, G. AU - Durand, A. AU - Manzanares, P. AU - Gilbert, H. J. AU - Juge, N. AU - Roussel, A. PY - 2004 DA - 2004// TI - The dual nature of the wheat xylanase protein inhibitor XIP-I: structural basis for the inhibition of family 10 and family 11 xylanases JO - J Biol Chem VL - 279 UR - https://doi.org/10.1074/jbc.M404225200 DO - 10.1074/jbc.M404225200 ID - Payan2004 ER - TY - JOUR AU - Reetz, M. T. AU - Carballeira, J. D. PY - 2007 DA - 2007// TI - Iterative saturation mutagenesis (ISM) for rapid directed evolution of functional enzymes JO - Nat Protoc VL - 2 UR - https://doi.org/10.1038/nprot.2007.72 DO - 10.1038/nprot.2007.72 ID - Reetz2007 ER - TY - JOUR AU - Sanchis, J. AU - Fernández, L. AU - Carballeira, J. D. AU - Drone, J. AU - Gumulya, Y. AU - Höbenreich, H. AU - Kahakeaw, D. AU - Kille, S. AU - Lohmer, R. AU - Peyralans, J. J. AU - Podtetenieff, J. AU - Prasad, S. AU - Soni, P. AU - Taglieber, A. AU - Wu, S. AU - Zilly, F. E. AU - Reetz, M. T. PY - 2008 DA - 2008// TI - Improved PCR method for the creation of saturation mutagenesis libraries in directed evolution: application to difficult-to-amplify templates JO - Appl Microbiol Biotechnol VL - 81 UR - https://doi.org/10.1007/s00253-008-1678-9 DO - 10.1007/s00253-008-1678-9 ID - Sanchis2008 ER - TY - JOUR AU - Silva, I. R. AU - Larsen, D. M. AU - Jers, C. AU - Derkx, P. AU - Meyer, A. S. AU - Mikkelsen, J. D. PY - 2013 DA - 2013// TI - Enhancing RGI lyase thermostability by targeted single point mutations JO - Appl Microbiol Biotechnol VL - 97 UR - https://doi.org/10.1007/s00253-013-5184-3 DO - 10.1007/s00253-013-5184-3 ID - Silva2013 ER - TY - JOUR AU - Sokkar, P. AU - Mohandass, S. AU - Ramachandran, M. PY - 2011 DA - 2011// TI - Multiple templates-based homology modeling enhances structure quality of AT1 receptor: validation by molecular dynamics and antagonist docking JO - J Mol Model VL - 17 UR - https://doi.org/10.1007/s00894-010-0860-z DO - 10.1007/s00894-010-0860-z ID - Sokkar2011 ER - TY - JOUR AU - Song, L. AU - Dumon, C. AU - Siguier, B. AU - Andre, I. AU - Eneyskaya, E. AU - Kulminskaya, A. AU - Bozonnet, S. AU - O’Donohue, M. J. PY - 2014 DA - 2014// TI - Impact of an N-terminal extension on the stability and activity of the GH11 xylanase from Thermobacillus xylanilyticus JO - J Biotechnol VL - 174 UR - https://doi.org/10.1016/j.jbiotec.2014.01.004 DO - 10.1016/j.jbiotec.2014.01.004 ID - Song2014 ER - TY - JOUR AU - Sriyapai, T. AU - Somyoonsap, P. AU - Matsui, K. AU - Kawai, F. AU - Chansiri, K. PY - 2011 DA - 2011// TI - Cloning of a thermostable xylanase from Actinomadura sp. S14 and its expression in Escherichia coli and Pichia pastoris JO - J Biosci Bioeng VL - 111 UR - https://doi.org/10.1016/j.jbiosc.2010.12.024 DO - 10.1016/j.jbiosc.2010.12.024 ID - Sriyapai2011 ER - TY - JOUR AU - Stephens, D. E. AU - Khan, F. I. AU - Singh, P. AU - Bisetty, K. AU - Singh, S. AU - Permaul, K. PY - 2014 DA - 2014// TI - Creation of thermostable and alkaline stable xylanase variants by DNA shuffling JO - J Biotechnol VL - 187 UR - https://doi.org/10.1016/j.jbiotec.2014.07.446 DO - 10.1016/j.jbiotec.2014.07.446 ID - Stephens2014 ER - TY - JOUR AU - Tan, Z. B. AU - Tang, C. D. AU - Wu, M. C. AU - He, Y. AU - Hu, D. AU - Wang, J. Q. PY - 2014 DA - 2014// TI - Exploration of disulfide bridge and N-glycosylation contributing to high thermostability of a hybrid xylanase JO - Protein Pept Lett VL - 21 UR - https://doi.org/10.2174/0929866521666140328113126 DO - 10.2174/0929866521666140328113126 ID - Tan2014 ER - TY - CHAP AU - Thorton, J. AU - Taylor, W. R. ED - Findlay, J. B. C. ED - Geisow, M. J. PY - 1989 DA - 1989// TI - Structure prediction BT - The IRL Press series in protein sequencing PB - IRLPress CY - Oxford ID - Thorton1989 ER - TY - JOUR AU - Tian, J. AU - Wang, P. AU - Huang, L. AU - Chu, X. Y. AU - Wu, N. F. AU - Fan, Y. L. PY - 2013 DA - 2013// TI - Improving the thermostability of methyl parathion hydrolase from Ochrobactrum sp. M231 using a computationally aided method JO - Appl Microbiol Biotechnol VL - 97 UR - https://doi.org/10.1007/s00253-012-4411-7 DO - 10.1007/s00253-012-4411-7 ID - Tian2013 ER - TY - JOUR AU - Trevizano, L. M. AU - Ventorim, R. Z. AU - Rezende, S. T. AU - Junior, F. P. S. AU - Guimarães, V. M. PY - 2012 DA - 2012// TI - Thermostability improvement of Orpinomyces sp. xylanase by directed evolution JO - J Mol Catal B Enzym VL - 81 UR - https://doi.org/10.1016/j.molcatb.2012.04.021 DO - 10.1016/j.molcatb.2012.04.021 ID - Trevizano2012 ER - TY - JOUR AU - Watanabe, M. AU - Fukada, H. AU - Ishikawa, K. PY - 2016 DA - 2016// TI - Construction of thermophilic xylanase and its structural analysis JO - Biochemistry VL - 55 UR - https://doi.org/10.1021/acs.biochem.6b00414 DO - 10.1021/acs.biochem.6b00414 ID - Watanabe2016 ER - TY - JOUR AU - Xue, H. P. AU - Zhou, J. G. AU - You, C. AU - Huang, Q. AU - Lu, H. PY - 2012 DA - 2012// TI - Amino acid substitutions in the N-terminus, cord and α-helix domains improved the thermostability of a family 11 xylanase XynR8 JO - J Ind Microbiol Biotechnol VL - 39 UR - https://doi.org/10.1007/s10295-012-1140-y DO - 10.1007/s10295-012-1140-y ID - Xue2012 ER - TY - JOUR AU - Yin, X. AU - Li, J. F. AU - Wang, C. J. AU - Hu, D. AU - Wu, Q. AU - Gu, Y. AU - Wu, M. C. PY - 2015 DA - 2015// TI - Improvement in the thermostability of a type A feruloyl esterase, AuFaeA, from Aspergillus usamii by iterative saturation mutagenesis JO - Appl Microbiol Biotechnol VL - 99 UR - https://doi.org/10.1007/s00253-015-6889-2 DO - 10.1007/s00253-015-6889-2 ID - Yin2015 ER - TY - JOUR AU - You, C. AU - Huang, Q. AU - Xue, H. AU - Xu, Y. AU - Lu, H. PY - 2010 DA - 2010// TI - Potential hydrophobic interaction between two cysteines in interior hydrophobic region improves thermostability of a family 11 xylanase from Neocallimastix patriciarum JO - Biotechnol Bioeng VL - 105 ID - You2010 ER - TY - JOUR AU - Zhang, F. AU - Chen, J. J. AU - Ren, W. Z. AU - Lin, L. B. AU - Zhou, Y. AU - Zhi, X. Y. AU - Tang, S. K. AU - Li, W. J. PY - 2012 DA - 2012// TI - Cloning, expression, and characterization of an alkaline thermostable GH11 xylanase from Thermobifida halotolerans YIM 90462T JO - J Ind Microbiol Biotechnol VL - 39 UR - https://doi.org/10.1007/s10295-012-1119-8 DO - 10.1007/s10295-012-1119-8 ID - Zhang2012 ER - TY - JOUR AU - Zhang, H. M. AU - Li, J. F. AU - Wang, J. Q. AU - Yang, Y. J. AU - Wu, M. C. PY - 2014 DA - 2014// TI - Determinants for the improved thermostability of a mesophilic family 11 xylanase predicted by computational methods JO - Biotechnol Biofuels VL - 7 UR - https://doi.org/10.1186/1754-6834-7-3 DO - 10.1186/1754-6834-7-3 ID - Zhang2014 ER - TY - JOUR AU - Zhao, L. M. AU - Geng, J. AU - Guo, Y. Q. AU - Liao, X. D. AU - Liu, X. H. AU - Wu, R. J. AU - Zheng, Z. J. AU - Zhang, R. J. PY - 2015 DA - 2015// TI - Expression of the Thermobifida fusca xylanase Xyn11A in Pichia pastoris and its characterization JO - BMC Biotechnol VL - 15 UR - https://doi.org/10.1186/s12896-015-0135-y DO - 10.1186/s12896-015-0135-y ID - Zhao2015 ER - TY - JOUR AU - Zheng, H. C. AU - Liu, Y. H. AU - Sun, M. Z. AU - Han, Y. AU - Wang, J. L. AU - Sun, J. S. AU - Lu, F. P. PY - 2014 DA - 2014// TI - Improvement of alkali stability and thermostability of Paenibacillus campinasensis family-11 xylanase by directed evolution and site-directed mutagenesis JO - J Ind Microbiol Biotechnol VL - 41 UR - https://doi.org/10.1007/s10295-013-1363-6 DO - 10.1007/s10295-013-1363-6 ID - Zheng2014 ER -