Resequencing and annotation of the Nostoc punctiforme ATTC 29133 genome: facilitating biofuel and high-value chemical production

AMB Express

Table 3 Genome statistics for Nostoc punctiforme ATCC 29133

Attribute	Meeks et al. (2001)		This study
Attribute	Value	% of total	Value	% of total
Genome size (bp)	9059191	100	9064343	100
DNA coding (bp)	7015747	77.44	7393120	81.56
DNA G+C (bp)	3746385	41.35	3751137	41.38
DNA scaffolds	6	100	65	100
Total genes	6791	100	7775	100
Protein coding genes	6690	98.51	7664	98.57
RNA genes	101	1.49	111	1.43
Genes with function prediction	4089	60.21	5076	65.29
Genes without assigned function	2601	38.3	2588	33.29
Genes assigned to COGs	3432	50.54	3598	46.28
Genes with Pfam domains	5010	73.77	5381	69.21
Genes with signal peptides	274	4.03	297	3.82
Genes with transmembrane helices	1525	22.46	1635	21.03
Genes in biosynthetic clusters	602	8.86	1080	13.89
CRISPR repeats	8		10