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Table 4 Alignment between antimicrobial peptides and YD1

From: Glycin-rich antimicrobial peptide YD1 from B. amyloliquefaciens, induced morphological alteration in and showed affinity for plasmid DNA of E. coli

Alignment

APD IDa

Similarity

(%)

HRb

(%)

Net charge

Gram activity

MWc

(Da)

Source

AP02344

40

14

+1

+, −

798.89

Crocodylus siamensis

AP02672

36.84

31

+5

+, −

2114.6

Hydrophylax bahuvistara

AP00320

35

52

+3

+, −

1941.3

Uperoleia inundata

AP02606

33.33

50

+1

+, − 

1106.3

Rana

limnocharis

YD1

-A-P-K-G-V-Q-G-P-N-G-

Current study

100

20

+1

+, −

924.0

B. amyloliquefaciens CBSYD1

  1. aAntimicrobial Peptide Database Identification
  2. bHydrophobic Residue
  3. cMolecular weight (Dalton)