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Table 2 Nucleotide content and gene count levels of the genome predicted in IMG/ER

From: Comprehensive genomic and phenotypic metal resistance profile of Pseudomonas putida strain S13.1.2 isolated from a vineyard soil

Attribute

Genome (total)

Value

% of totala

Size (bp)

6,621,848

100

G + C content (bp)

4,128,086

62.34

Coding region (bp)

5,922,241

89.43

Total genes

5979

100

RNA genes

165

2.76

Protein-coding genes

5814

97.24

Genes in paralog clusters

4841

80.97

Genes assigned to COGs

4343

72.64

Genes with signal peptides

643

10.75

Genes with transmembrane helices

1324

22.14

Paralogous groups

0

Pseudogenes

0

  1. a The total is based on either the size of the genome in base pairs or the total number of protein coding genes in the annotated genome