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Table 5 Species from Actinobacteria

From: Deep RNA-Seq profile reveals biodiversity, plant–microbe interactions and a large family of NBS-LRR resistance genes in walnut (Juglans regia) tissues

Taxonomy name ID Lineage
Arthrobacter 1663 Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Micrococcaceae
Modestobacter 88138 Bacteria; Actinobacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae
Microlunatus 29404 Bacteria; Actinobacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae
Actinoplanes 1865 Bacteria; Actinobacteria; Actinobacteria; Micromonosporales; Micromonosporaceae
Nakamurella 53460 Bacteria; Actinobacteria; Actinobacteria; Nakamurellales; Nakamurellaceae
Streptomyces 1883 Bacteria; Actinobacteria; Actinobacteria; Streptomycetales; Streptomycetaceae
Propionibacterium 1743 Bacteria; Actinobacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae
Corynebacterium 1716 Bacteria; Actinobacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae
Micrococcus 1269 Bacteria; Actinobacteria; Actinobacteria; Micrococcales; Micrococcaceae
  1. We obtain the taxonomy ID from http://www.ncbi.nlm.nih.gov/Taxonomy/TaxIdentier/tax_identifer.cgi using the taxonomy name, which is then used to get the lineage. The taxonomy names were obtained from best entry in a BLAST search to the ‘nt’ database