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AMB Express
Fig. 3 | AMB Express

Fig. 3

From: Deep RNA-Seq profile reveals biodiversity, plant–microbe interactions and a large family of NBS-LRR resistance genes in walnut (Juglans regia) tissues

Fig. 3

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Phytophthora: C43181_G1_I1 encodes a 293 bp long ORF with a predicted molecular weight of 30 kDa and has 97 % identity GAPDH from P. parasitica and P. infestans, and a 96 % identity to the GAPDH from P. sojae. Thus, although the presence of a pathogen from the Phytophthora genus is almost certain, it is not possible to determine the exact strain of this pathogen. The Phytophthora GAPDH also shares a 70 % identity with the GAPDH in human placenta. a Multiple sequence alignment of the GAPDHs obtained using ENDscript 2.x (Robert and Gouet 2014). b Structural superimposition of the C43181_G1_I1 GAPDH to the structure of the human placental GAPDH (PDBid:1U8F, chain O). The structure of C43181_G1_I1 GAPDH was modelled using SWISSMODEL

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