Anaerolineaceae and Methanosaeta turned to be the dominant microorganisms in alkanes-dependent methanogenic culture after long-term of incubation

Bo Liang; Li-Ying Wang; Serge Maurice Mbadinga; Jin-Feng Liu; Shi-Zhong Yang; Ji-Dong Gu; Bo-Zhong Mu

doi:10.1186/s13568-015-0117-4

AMB Express

Table 1 A survey of oil and hydrocarbon associated Anaerolineaceae

From: Anaerolineaceae and Methanosaeta turned to be the dominant microorganisms in alkanes-dependent methanogenic culture after long-term of incubation

References	Accession number	Clone/strain	Isolation source	Region	Percentage^a
This study	KJ432869	AD_Bacteria_59	Methanogenic n-alkanes-degrading consortium from oily sludge enrichment cultures for over 1,300 days	China	100
Sun and Cupples (2012)	JN806351	DSS-20	Toluene-degrading microbial communities	USA	100
Sun and Cupples (2012)	JN806343	DSS-12	Toluene-degrading microbial communities	USA	99
Yan et al. (2006)	DQ080186	B45	The reductive dechlorination of 2,3,4,5-tetrachlorobiphenyl in three different sediment cultures	USA	96
Winderl et al. (2008)	EU266919	D25_46	Toluene degraders in tar-oil contaminated aquifer sediments	Germany	96
Winderl et al. (2008)	EU266901	D25_25	Toluene degraders in tar-oil contaminated aquifer sediments	Germany	96
Tischer et al. (2013)	JQ087241	Clone 1_76_3_b	Push core sediment sample from the vadose zone of a hydrocarbon contaminated aquifer	Germany	95
Li et al. (Genbank)^b	KJ730067	Clone B199	Biogas digester sediment	China	94
Sherry et al. (2013)	JQ033882	SRO176E01	Anaerobic biodegradation of crude oil under sulphate-reducing conditions in 176 days incubation period	UK	93
Sherry et al. (2013)	JQ033889	SRO302B05	Anaerobic biodegradation of crude oil under sulphate-reducing conditions in 302 days incubation period	UK	93
Lienen et al. (Genbank)^b	KF147579	Clone 7932270	Mesophilic anaerobic digester in full-scale biogas plant	Germany	93
Gieg et al. (2008)	EU037975	lg1e04	Bioenergy production via microbial conversion of residual oil to natural gas	USA	93
Dojka et al. (1998)	AF050570	WCHB1-57	Hydrocarbon and chlorinated-solvent-contaminated aquifer	USA	93
Gray et al. (2011)	GU996561	MO302A7	Crude oil degrading methanogenic microcosms, 302 days	UK	92
Gieg et al. (2008)	EU037963	E449-5	Bioenergy production via microbial conversion of residual oil to natural gas	USA	91
Gray et al. (2011)	GU996562	MO302C11	Crude oil degrading methanogenic microcosms, 302 days	UK	91
Penner et al. (Genbank)^b	EU522649	Ctrl1-8D	Hydrocarbon-degrading methanogenic microbial consortia from oil sands tailings	Canada	91
Lv et al. (Genbank)^b	KJ468504	Clone B16-24	Palmitate degradation microcosm in oil field	China	90
Yamada et al. (2007)	NR041354	GOMI-1	Methanogenic propionate-degrading consortia in thermophilic digester sludge	Japan	90
Yamada et al. (2007)	NR041355	Strain KOME-1	Methanogenic propionate-degrading consortia in thermophilic digester sludge	Japan	90
Dojka et al. (1998)	AF050569	WCHB1-31	Hydrocarbon and chlorinated-solvent-contaminated aquifer	USA	90
Allen et al. (2007)	DQ663957	5C38	Petroleum-contaminated sediments	USA	90
Abu Laban et al. (2015)	KJ635758	IsoM-30	Biodegradation of C₇ and C₈ iso-alkanes under methanogenic conditions	Canada	90
Abu Laban et al. (2015)	KJ635796	IsoM-108	Biodegradation of C₇ and C₈ iso-alkanes under methanogenic conditions	Canada	90
Herrmann et al. (2008)	EF417532	BAC19-1	In situ microcosms in a monitoring well of an anoxic benzene-contaminated aquifer	Germany	89
Schlötelburg et al. (2000)	AJ249111	SHA-53	Bacteria of an anaerobic 1,2-dichloropropane-dechlorinating mixed culture	Germany	89
Winderl et al. (2008)	EU266859	D15_19	Toluene degraders in tar-oil contaminated aquifer sediments	Germany	89
Winderl et al. (2008)	EU266865	D15_26	Toluene degraders in tar-oil contaminated aquifer sediments	Germany	88
Abu Laban et al. (2015)	KJ635769	IsoM-41	Biodegradation of C₇ and C₈ iso-alkanes under methanogenic conditions	Canada	88
Kuppardt et al. (Genbank)^b	KF443371	Zz9-00_C6	Toluene-degrading consortia	Germany	87
Savage et al. (2010)	GU211123	ZodOTU50-C07	Biodegradation of low-molecular-weight alkanes under mesophilic, sulfate-reducing conditions	USA	87
Riviere et al. (2009)	CU922908	QEDR2BG03	Mesophilic anaerobic digester which treats municipal wastewater sludge	France	87
Fang (Genbank)^b	JQ772434	420DB-7	High-temperature oil field production fluids incubated for 420 days	China	86
Cheng and Lu (Genbank)^b	JX088360	HB1_18	Methanogenic hexadecane-degrading consortium at different incubation temperatures enriched with crude oil-contaminated soil	China	86
Cheng and Lu (Genbank)^b	JX088361	LB1_11	Methanogenic hexadecane-degrading consortium at different incubation temperatures enriched with crude oil-contaminated soil	China	86
Savage et al. (2010)	GU211124	ZodOTU21-C08	Biodegradation of low-molecular-weight alkanes under mesophilic sulfate-reducing conditions	USA	85
Cheng and Lu (Genbank)^b	JF946983	Clone L35B_120	Methanogenic hexadecane-degrading consortium at different incubation temperatures enriched with crude oil-contaminated soil	China	84
Cheng and Lu (Genbank)^b	JF946983	Clone L35B_120	Methanogenic hexadecane-degrading consortium at different incubation temperatures enriched with crude oil-contaminated soil	China	84
Wang et al. (Genbank)^b	JN038290	EK_Ca689	Petroleum-contaminated soil	China	81
Ficker et al. (1999)	AF423186	Eub-6	Toluene-degrading methanogenic consortium	Canada	81
Winderl et al. (2008)	EU266855	D15_15	Toluene degraders in tar-oil contaminated aquifer sediments	Germany	80
Militon et al. (2010)	AM935699	AMCH2	Pilot-scale bioremediation process of a hydrocarbon-contaminated soil	France	77

Family level assignment based on RDP taxonomic classification.
^aSequence identity with KJ432869 (this study) determined by BLAST.
^bUnpublished.

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