Figure 5From: Fungal strain matters: colony growth and bioactivity of the European medicinal polypores Fomes fomentarius, Fomitopsis pinicola and Piptoporus betulinus Phylogenetic placement of F. pinicola strains inferred by using the Maximum Likelihood method based on the Hasegawa-Kishino-Yano model. The tree with the highest log likelihood (-1629.3947) is shown. Initial tree(s) for the heuristic search were obtained by applying the Neighbor-Joining method to a matrix of pairwise distances estimated using the Maximum Composite Likelihood (MCL) approach. A discrete Gamma distribution was used to model evolutionary rate differences among sites (5 categories (+G, parameterā=ā0.3750)). The tree is drawn to scale, with branch lengths measured in the number of substitutions per site. The analysis involved 61 nucleotide sequences. All positions with less than 95% site coverage were eliminated. There were a total of 504 positions in the final dataset. Bootstrap values above 75 % are given (1 000 replications). Evolutionary analyses were conducted in MEGA6.Back to article page