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Table 1 Sequence of each DNA oligonucleotide used in this study

From: The use of nano-sized acicular material, sliding friction, and antisense DNA oligonucleotides to silence bacterial genes

Strain

Target gene

Name of antisense oligonucleotide

Accession no.

Position

Sequence of antisense oligonucleotide DNA (5′-3′)

Length of antisense oligonucleotide DNA (bp)

Escherichia coli JM109 (pUC18)

β-lactamase (bla)

B-LAC15

L08752

876-891

ACTCAT ACTCTTCCT

15

  

B-LAC90

 

851-940

AGGCAAAATGCCGCAAAAAAGGGAATAAGGGCGACACGGAAATGTTGAATACTCAT ACTCTTCCTTTTTCAATATTATTGAAGCATTTAT

90

 

β-galactosidase (lacZα)

LacZ15

 

221-207

GGTCAT AGCTGTTTC

15

  

LacZ90

 

185-274

CTGCAGGTCGACTCTAGAGGATCCCCGGGTACCGAGCTCGAATTCGTAATCATGGTCAT AGCTGTTTCCTGTGTGAAATTGTTATCCGCT

90

Pseudomonas pseudoalcaligenes KF707

Hydrolase (bphD)

BphD15

X66123

178-164

GTGCGGTCAT TTTTC

15

  

BphD90

 

231-142

GGTAGAACTTTCGGTGAGTGCGGTCAT TTTTCATCCTTTAAGTGAGTGGAGTGGAAACTGGTCAGGCGCAGCGCTTCATGCCGCGCCGGG

90

Bacillus subtilis str.168

Sporulation initiation protein (spo0A)

Spo0A15

AL009129

2518821-2518835

CTCCAC GTTTCTTCC

15

  

Spo0A90

 

2518768-2518857

CTTAACAGGCTTACCAGCTCTCGATTATCATCAGCAACACAAACTTTAATTTTCTCCAC GTTTCTTCCTCCCCAAATGTAGTTAACAGGA

90

  1. Bold italic letter indicates sequence complementary to the translation codon (AUG or GUG) in a target mRNA.