Skip to main content

Table 1 Identification of photosynthetic isolates using DNA barcoding of U16S/U18S rDNA gene

From: Bioprospecting the thermal waters of the Roman baths: isolation of oleaginous species and analysis of the FAME profile for biodiesel production

Isolate

Abbr.

Division

GenBank match ref.

Coverage%*

Max Ident% **

Max Score ***

Other (NCBI no)

Coelastrella saipanensis*

Cs

Chlorophyta

AB055800

100

99

3090

BLAST and morphology (JX316760)

Klebsormidium sp.

K sp.

Chlorophyta

FR717537.1

98

99

1929

(JX316761)

Hantzschia sp.*

H sp.

Bacillariophyta

    

Morphology

Chroococcidiopsis thermalis

Ct

Cyanophyta

AB039005.1

100

99

2488

(JX316762)

Microcoleus chthonoplastes*

Mc

Cyanophyta

EF654089.1

96

91

1844

Additional file 1: Figure S1

Mastigocladus laminosus

Ml

Cyanophyta

AB607204.1

95

99

2385

(JX316764)

Oscillatoria sancta

Os

Cyanophyta

AF132933

96

99

1522

Additional file 1: Figure S2

  1. Sequences compared to the NCBI online database using BLAST. Matches based on ‘Max Score’. Date accessed 17.01.2012.
  2. *% of sequence covered by database hit **% similarity of sequence covered by hit ***The score is calculated from the sum of the match rewards and the mismatch (independently for each segment).