Skip to main content

Table 2 Sequenced genomes with most hits to the mangrove metagenomes

From: A potential source for cellulolytic enzyme discovery and environmental aspects revealed through metagenomics of Brazilian mangroves

RJ Mangrove
Genome Kingdom/Group Gram Strain Oxygen requeriment Motility Pathogenic Habitat Salinity Number of reads
Syntrophobacter fumaroxidans MPOB Bacteria/Deltaproteobacteria Negative Anaerobic No No Aquatic   1,339
Desulfatibacillum alkenivorans AK-01 Bacteria/Deltaproteobacteria Negative Anaerobic No No Aquatic   1,007
Syntrophus aciditrophicus SB Bacteria/Deltaproteobacteria Negative Anaerobic No   Multiple   584
Thioalkalivibrio sulfidophilus HL-EbGr7 Bacteria/Gammaproteobacteria Negative Aerobic Yes No Specialized Moderate halophilic 472
Roseiflexus sp. RS-1 Bacteria/Chloroflexi Negative Facultative Yes   Specialized   421
Gemmatimonas aurantiaca T-27 Bacteria Negative Aerobic Yes No    374
Opitutus terrae PB90-1 Bacteria   Anaerobic Yes No Aquatic   290
Thermomicrobium roseum DSM 5159 Bacteria/Chloroflexi Negative Aerobic No No Specialized   224
Geobacter uraniireducens Rf4 Bacteria/Deltaproteobacteria Negative Microaerophilic    Multiple   222
Thiobacillus denitrificans ATCC 25259 Bacteria/Betaproteobacteria Negative Facultative Yes No Multiple   214
Methanosarcina acetivorans C2A Archaea/Euryarchaeota   Anaerobic No No Aquatic   179
Methanoculleus marisnigri JR1 Archaea/Euryarchaeota Negative Anaerobic Yes No Aquatic   170
BA Mangrove
Genome Kingdom/Group Gram Strain Oxygen requeriment Motility Pathogenic Habitat Salinity Number of reads
Thiobacillus denitrificans ATCC 25259 Bacteria/Betaproteobacteria Negative Facultative Yes No Multiple   984
Syntrophobacter fumaroxidans MPOB Bacteria/Deltaproteobacteria Negative Anaerobic No No Aquatic   911
Desulfatibacillum alkenivorans AK-01 Bacteria/Deltaproteobacteria Negative Anaerobic No No Aquatic   771
Syntrophus aciditrophicus SB Bacteria/Deltaproteobacteria Negative Anaerobic No   Multiple   492
Gemmatimonas aurantiaca T-27 Bacteria Negative Aerobic Yes No    326
Opitutus terrae PB90-1 Bacteria Negative Anaerobic Yes No Aquatic   250
Geobacter uraniireducens Rf4 Bacteria/Deltaproteobacteria Negative Microaerophilic    Multiple   230
Roseiflexus sp. RS-1 Bacteria/Chloroflexi Negative Facultative Yes   Specialized   220
Rubrobacter xylanophilus DSM 9941 Bacteria/Actinobacteria Positive Aerobic No No Specialized   211
Nocardioides sp. JS614 Bacteria/Actinobacteria Positive Aerobic No No Terrestrial   157
Thioalkalivibrio sulfidophilus HL-EbGr7 Bacteria/Gammaproteobacteria Negative Aerobic Yes No Specialized   151