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Table 1 PCR primers for detection of rumen bacteria

From: Comparative evaluation of rumen metagenome community using qPCR and MG-RAST

Target bacterium

Primer

Product

 

Forward primer

Reverse primer

Size(bp)

Total bacteria

CCTACGGGAGGCAGCAG

ATTACCGCCGCTGTTGG

194

Prevotella bryantii

ACTGCAGCGCGAACTGTCAGA

ACCTTACGGTGGCAGTGTCTC

540

Fibrobacter succinogenes

GGTATGGGATGAGCTTGC

GCCTGCCCCTGAACTATC

445

Ruminococcus flavefaciens

GGACGATAATTGACGGTACTT

GCAATCYGAACTGGGACAAT

520

Selenomonas ruminantium

TGCTAATACCGAATGTTG

TCCTGCATCAAGAAAGA

513

Methanomicrobiales

ATCGRTACGGGTTGTGGG

CACCTAACGCRCATHGTTTAC

506