Table 1 Number of sequences showing homology to genes associated with KEGG pathways in the categories "carbohydrate metabolism", "biodegradation of xenobiotics" and "energy metabolism"
KEGG category | Distinct ECs | ECs found in the data (% abundance) | N° of matches |
|---|---|---|---|
Energy metabolism | 173 | 92 (53.5%) | 3,857 |
Carbon fixation | 25 | 21 (84%) | 986 |
Methane metabolism | 33 | 12 (36.4%) | 202 |
Nitrogen metabolism | 58 | 30 (51.7%) | 739 |
Oxidative phosphorylation | 17 | 09 (52.9%) | 972 |
Photosynthesis | 03 | 01 (33%) | 168 |
Redutive carboxylate cycle (CO2 fixation) | 13 | 13 (100%) | 531 |
Sulfur metabolism | 30 | 12 (40%) | 267 |
Biodegradation of Xenobiotics | 217 | 66 (30.4%) | 2,495 |
DDT degradation | 10 | 03 (30%) | 74 |
1,2-Dichloroethane degradation | 05 | 04 (80%) | 85 |
1,4-Dichlorobenzene degradation | 22 | 06 (27.3%) | 74 |
2,4-Dichlorobenzoate degradation | 29 | 03 (10.3%) | 18 |
3-Chloroacrylic acid degradation | 04 | 04 (100%) | 185 |
Atrazine degradation | 12 | 04 (33.3%) | 24 |
Benzoate degradation via CoA ligation | 45 | 23 (51%) | 994 |
Benzoate degradation via hydroxylation | 50 | 18 (36%) | 158 |
Biphenyl degradation | 13 | 03 (23.1%) | 71 |
Caprolactam degradation | 22 | 10 (45.5%) | 131 |
Carbazole degradation | 11 | 01 (9.1%) | 03 |
Ethylbenzene degradation | 09 | 03 (33.3%) | 207 |
Fluorene degradation | 13 | 03(23.1%) | 64 |
Naphthalene and anthracene degradation | 21 | 03 (14.3%) | 188 |
Styrene degradation | 21 | 09 (42.9%) | 73 |
Tetrachloroethene degradation | 07 | 01 (14.3%) | 57 |
Toluene and xylene degradation | 22 | 07 (31.8%) | 32 |
γ-Hecachlorocyclohexane degradation | 24 | 07 (29.2%) | 57 |
Carbohydrate metabolism | 576 | 284 (49.3%) | 9,901 |
Aminosugars metabolism | 41 | 25 (61%) | 589 |
Ascorbate and aldarate metabolism | 43 | 18 (41.9%) | 367 |
Butanoate metabolism | 53 | 34 (64.2%) | 1,802 |
C5-Branched dibasic acid metabolism Fructose | 17 | 03 (17.6%) | 126 |
and mannose metabolism | 66 | 28 (42.4%) | 591 |
Galactose metabolism | 37 | 19 (51.4%) | 529 |
Glycolysis/Gluconeogenesis | 42 | 29 (69%) | 858 |
Glyoxylate and dicarboxylate metabolism | 58 | 30 (51.7%) | 676 |
Inositol metabolism | 09 | 07 (77.8%) | 90 |
Inositol phosphate metabolism | 30 | 05 (16.4%) | 34 |
Nucleotide sugars metabolism | 34 | 18 (52.9%) | 517 |
Pentose and glucuronate interconversions | 56 | 27(48.2%) | 229 |
Pentose phosphate pathway | 39 | 31 (79.5%) | 846 |
Propanoate metabolism | 49 | 34 (69.4%) | 1032 |
Pyruvate metabolism | 65 | 39 (60%) | 1,117 |
Starch and sucrose metabolism | 73 | 33 (45.2%) | 498 |